Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02996 and BPUM_1712

See DNA alignment / Visit BSNT_02996 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:31
# Commandline: needle
#    -asequence pep-align/BSNT_02996.1.24716.seq
#    -bsequence pep-align/BPUM_1712___ynfC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02996-BPUM_1712___ynfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02996-BPUM_1712___ynfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02996
# 2: BPUM_1712___ynfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:      53/122 (43.4%)
# Similarity:    71/122 (58.2%)
# Gaps:          16/122 (13.1%)
# Score: 229.5
# 
#
#=======================================

BSNT_02996         1 MKKVTILKASILFLAIASFHLLSIPHAFDIGHHYKAVADQQEMHEMKAGQ     50
                     |||..:||.::||:|:|||||.|:||:..:.||.|.||| ||.||||..|
BPUM_1712___y      1 MKKNMLLKLAVLFIALASFHLFSMPHSVQVYHHAKVVAD-QESHEMKIAQ     49

BSNT_02996        51 NADDEKKSITGAFTLTALWAMAVLLLTAESKSTGYSR-----RRQRKKSF     95
                     ...||||.    ..::|::|...:||...|.:.|::|     :..|||..
BPUM_1712___y     50 TMGDEKKQ----KHVSAVFAAFTVLLMIGSMTAGFARITHTDQYDRKKKH     95

BSNT_02996        96 ILAKFYQSSYFGKLHVQHHPIM    117
                     :||.|||||||....|      
BPUM_1712___y     96 LLAVFYQSSYFRLSRV------    111


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