Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02978 and BPUM_1699

See DNA alignment / Visit BSNT_02978 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence pep-align/BSNT_02978___citB.1.24716.seq
#    -bsequence pep-align/BPUM_1699___citB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02978___citB-BPUM_1699___citB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02978___citB-BPUM_1699___citB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02978___citB
# 2: BPUM_1699___citB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 909
# Identity:     793/909 (87.2%)
# Similarity:   852/909 (93.7%)
# Gaps:           0/909 ( 0.0%)
# Score: 4181.0
# 
#
#=======================================

BSNT_02978___      1 MANEQKTAAKDVFQARKTFTTNGKTYHYYSLKALEDSGIGKVSKLPYSIK     50
                     |:.:|:.|.:|.||:||||:|||||||||||:|||..|||.|||||||||
BPUM_1699___c      1 MSKQQQVAKQDAFQSRKTFSTNGKTYHYYSLEALEKQGIGNVSKLPYSIK     50

BSNT_02978___     51 VLLESVLRQVDGFVIKKEHVENLAKWGTAELKDIDVPFKPSRVILQDFTG    100
                     ||||||||||||.|||||||||||||||||:|:|||||||||||||||||
BPUM_1699___c     51 VLLESVLRQVDGRVIKKEHVENLAKWGTAEVKEIDVPFKPSRVILQDFTG    100

BSNT_02978___    101 VPAVVDLASLRKAMAAVGGDPDKINPEIPVDLVIDHSVQVDKAGTEDALA    150
                     |||||||||||||||.|||||||||||||||||||||||||||||||||.
BPUM_1699___c    101 VPAVVDLASLRKAMADVGGDPDKINPEIPVDLVIDHSVQVDKAGTEDALN    150

BSNT_02978___    151 VNMDLEFERNAERYKFLSWAKKAFNNYQAVPPATGIVHQVNLEFLASVVH    200
                     :|||||||||||||.||||||||||||||||||||||||||||:||||||
BPUM_1699___c    151 INMDLEFERNAERYNFLSWAKKAFNNYQAVPPATGIVHQVNLEYLASVVH    200

BSNT_02978___    201 AIEEDGELVTYPDTLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQPSY    250
                     |||||||::|||||||||||||||||||||||||||||||||||||||||
BPUM_1699___c    201 AIEEDGEIITYPDTLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQPSY    250

BSNT_02978___    251 FPVPEVIGAKLVGKLPNGTTATDLALKVTQVLREKGVVGKFVEFFGPGIA    300
                     |||||||||||||:||||||||||||||||||||||||.|||||||||:|
BPUM_1699___c    251 FPVPEVIGAKLVGELPNGTTATDLALKVTQVLREKGVVNKFVEFFGPGVA    300

BSNT_02978___    301 ELPLADRATIANMAPEYGATCGFFPVDEEALNYLRLTGRDPEHIDVVEAY    350
                     :||||||||||||||||||||||||||||||.||||||||.|.|::||.|
BPUM_1699___c    301 QLPLADRATIANMAPEYGATCGFFPVDEEALAYLRLTGRDEEQINIVEEY    350

BSNT_02978___    351 CRSNGLFYTPDAEDPQFTDVVEIDLSQIEANLSGPKRPQDLIPLSAMQET    400
                     .|:||||||||||:|.|||||||||||||:|||||||||||||||.|:||
BPUM_1699___c    351 SRANGLFYTPDAEEPIFTDVVEIDLSQIESNLSGPKRPQDLIPLSKMKET    400

BSNT_02978___    401 FKKQLVSPAGNQGFGLNAEEENKEIKFKLLNGEETVMKTGAIAIAAITSC    450
                     |.:.:.||||||||||...|.:|:|:|.|.|||:.|||||||||||||||
BPUM_1699___c    401 FHEHIESPAGNQGFGLEKSELDKQIEFDLANGEKAVMKTGAIAIAAITSC    450

BSNT_02978___    451 TNTSNPYVLIGAGLVAKKAVELGLKVPNYVKTSLAPGSKVVTGYLVNSGL    500
                     |||||||||||||||||||.|||:||||||||||||||||||||||||||
BPUM_1699___c    451 TNTSNPYVLIGAGLVAKKASELGMKVPNYVKTSLAPGSKVVTGYLVNSGL    500

BSNT_02978___    501 LPYMKELGFNLVGYGCTTCIGNSGPLSPEIEEAVAKNDLLITSVLSGNRN    550
                     |||:::||||:|||||||||||||||:.|||:||::||||||||||||||
BPUM_1699___c    501 LPYLRDLGFNIVGYGCTTCIGNSGPLAQEIEDAVSENDLLITSVLSGNRN    550

BSNT_02978___    551 FEGRIHPLVKGNYLASPPLVVAYALAGTVNINLKTDPIGVGKDGQNVYFN    600
                     |||||||||||||||||||||||||||||||:|..|||||.|:|:|||||
BPUM_1699___c    551 FEGRIHPLVKGNYLASPPLVVAYALAGTVNIDLTKDPIGVDKNGENVYFN    600

BSNT_02978___    601 DIWPSMDEINALVKQTVTPELFRKEYETVFDDNKRWNEIETTDEALYKWD    650
                     ||||||||||::||.||||||||.|||||||:|:|||||:|||:||||||
BPUM_1699___c    601 DIWPSMDEINSVVKSTVTPELFRSEYETVFDNNERWNEIKTTDDALYKWD    650

BSNT_02978___    651 SESTYIQNPPFFEEMSVEPGKVEPLKGLRVVGKFGDSVTTDHISPAGAIG    700
                     ..||||.||||||.:||||||||||||||||.||||||||||||||||||
BPUM_1699___c    651 ENSTYIDNPPFFENLSVEPGKVEPLKGLRVVAKFGDSVTTDHISPAGAIG    700

BSNT_02978___    701 KDTPAGKYLQEKGVSPRDFNSYGSRRGNHEVMMRGTFANIRIKNQIAPGT    750
                     |||||||||||:|||||||||||||||||.||||||||||||||||||||
BPUM_1699___c    701 KDTPAGKYLQERGVSPRDFNSYGSRRGNHHVMMRGTFANIRIKNQIAPGT    750

BSNT_02978___    751 EGGFTTYWPTGEVTSIYDACMKYKEDKTGLVVLAGKDYGMGSSRDWAAKG    800
                     |||:|||||||||||||||||:||||.|||.:||||||||||||||||||
BPUM_1699___c    751 EGGYTTYWPTGEVTSIYDACMRYKEDGTGLAILAGKDYGMGSSRDWAAKG    800

BSNT_02978___    801 TNLLGIRTVIAESFERIHRSNLVFMGVLPLQFKQGENADTLGLTGKEVIE    850
                     ||||||:.|:|||||||||||||||||||||||.||:|:|.||||.|..|
BPUM_1699___c    801 TNLLGIKFVLAESFERIHRSNLVFMGVLPLQFKDGESAETYGLTGTETFE    850

BSNT_02978___    851 VDVDETVRPRDLVTVRAINEDGNVTTFEAVVRFDSEVEIDYYRHGGILQM    900
                     |.|||||||||||||:||:.|||..|||.|||||||||||||||||||||
BPUM_1699___c    851 VHVDETVRPRDLVTVKAIDTDGNEKTFEVVVRFDSEVEIDYYRHGGILQM    900

BSNT_02978___    901 VLREKMKQS    909
                     |||||:..:
BPUM_1699___c    901 VLREKLASN    909


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02978 and BPUM_1699

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
