Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02970 and BPUM_1696

See DNA alignment / Visit BSNT_02970 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence pep-align/BSNT_02970___yneK.1.24716.seq
#    -bsequence pep-align/BPUM_1696___yneK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02970___yneK-BPUM_1696___yneK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02970___yneK-BPUM_1696___yneK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02970___yneK
# 2: BPUM_1696___yneK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:     102/142 (71.8%)
# Similarity:   118/142 (83.1%)
# Gaps:           0/142 ( 0.0%)
# Score: 552.0
# 
#
#=======================================

BSNT_02970___      1 MLEGWFLWFILFWVIMMVVLLSIGGFFMFRKFLKRLPKEDGRSELDWQDY     50
                     ||.||||||||||..||:.||:|||||||||||||||||||:|||||||.
BPUM_1696___y      1 MLSGWFLWFILFWGTMMIGLLAIGGFFMFRKFLKRLPKEDGKSELDWQDE     50

BSNT_02970___     51 YIENSRHLWNDENKQFLDELTAPVPELFRDAAKAKIAGKIGELALKEKVA    100
                     ||:.|.|||.:|:||.|:||..||||||||.||.|||||||||||||:.|
BPUM_1696___y     51 YIQKSLHLWREEDKQLLNELVLPVPELFRDVAKEKIAGKIGELALKEQAA    100

BSNT_02970___    101 KIDQQLMIKGYILATPKRDHTFLKRHLRDKKIDLEPYQTLLK    142
                     .|:..|:|:|||:|||||||.||.:.|::|.||..||:.|||
BPUM_1696___y    101 SINLDLIIRGYIIATPKRDHKFLLKRLQEKNIDHTPYEALLK    142


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.