Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02970 and BPUM_1696
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:30
# Commandline: needle
# -asequence dna-align/BSNT_02970___yneK.1.24716.seq
# -bsequence dna-align/BPUM_1696___yneK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02970___yneK-BPUM_1696___yneK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02970___yneK-BPUM_1696___yneK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02970___yneK
# 2: BPUM_1696___yneK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 311/447 (69.6%)
# Similarity: 311/447 (69.6%)
# Gaps: 36/447 ( 8.1%)
# Score: 1023.0
#
#
#=======================================
BSNT_02970___ 1 ATGCTGGAA--GGATGGTTTTTATGGTTTATTCTGTTTTGGGTGATCATG 48
|||.| || ||.||||||||.|||||.|||.|.|||||||..|..|||
BPUM_1696___y 1 ATGTT--AAGCGGCTGGTTTTTGTGGTTCATTTTATTTTGGGGTACGATG 48
BSNT_02970___ 49 ATGGTAGTCTTATTATCAATCGGCGGTTTTTTCATGTTTCGAAAGTTTTT 98
|||.|.|..|||.|..|||||||.||.|||||.||||||||.||.|||||
BPUM_1696___y 49 ATGATCGGATTACTCGCAATCGGTGGCTTTTTTATGTTTCGCAAATTTTT 98
BSNT_02970___ 99 AAAGCGTTTACCAAAAGAGGACGGCAGATCAGAGCTTGATTGGCAGGATT 148
|||.||.||.||.||.||.||.||.|.||||||||||||||||||||||.
BPUM_1696___y 99 AAAACGATTGCCGAAGGAAGATGGGAAATCAGAGCTTGATTGGCAGGATG 148
BSNT_02970___ 149 ACTATATTGAAAACAGCAGACATTTATGGAACGATGAAAACAAACAGTTT 198
|.||||||.||||.|||...||..|||||...||.|||.||||||||.||
BPUM_1696___y 149 AATATATTCAAAAGAGCCTCCACCTATGGCGGGAAGAAGACAAACAGCTT 198
BSNT_02970___ 199 CTAGATGAA-TTGACTGCGCCCGTGCCAGAGCTGTTCAGAGATGCAGCAA 247
.||.||||| |||.|| ..||.||.|||||.|||||.|||||||..||.|
BPUM_1696___y 199 TTAAATGAACTTGTCT-TACCTGTTCCAGAACTGTTTAGAGATGTCGCCA 247
BSNT_02970___ 248 AAGCTAAAATCGCAGGCAAAATCGGTGAGCTTGCATTAAAAGAA-AAGGT 296
|||..|||||.|||||.|||||.||.|||.|.|||||||||||| |||.|
BPUM_1696___y 248 AAGAAAAAATTGCAGGAAAAATTGGCGAGTTGGCATTAAAAGAACAAGCT 297
BSNT_02970___ 297 AGCAAAGATTGA-TCAGCAACTTATGATCA---AAGGCTATATTCTCGCA 342
||.|..|||.| |.|| ||||| |||| ..|||||||||.||||.
BPUM_1696___y 298 -GCCAGCATTAATTTAG--ACTTA--ATCATTCGCGGCTATATTATCGCT 342
BSNT_02970___ 343 ACTCCTAAAAGAGACCATACCTTCTTAAAAAGGCATCTGCGGGACAAAAA 392
||.||.||..|.||.||||..||.|||...|.||.|||.|..||.|||||
BPUM_1696___y 343 ACACCAAAGCGTGATCATAAGTTTTTATTGAAGCGTCTTCAAGAAAAAAA 392
BSNT_02970___ 393 AATCG----------ATTTGGAACCTTATCAGACCCTTCTCAAATAA 429
.|||| ||.||.|.|.|||| |.||||||
BPUM_1696___y 393 CATCGATCATACGCCATATGAAGCTTTAT----------TAAAATAA 429
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