Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02967 and BPUM_1694

See DNA alignment / Visit BSNT_02967 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_02967___ccdA.1.24716.seq
#    -bsequence pep-align/BPUM_1694___ccdA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02967___ccdA-BPUM_1694___ccdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02967___ccdA-BPUM_1694___ccdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02967___ccdA
# 2: BPUM_1694___ccdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity:     169/235 (71.9%)
# Similarity:   205/235 (87.2%)
# Gaps:           0/235 ( 0.0%)
# Score: 935.0
# 
#
#=======================================

BSNT_02967___      1 MGDVNYFLTFGAGFLSFISPCCLPLYPAFLSYITGVSMDDVKTEKLLLQK     50
                     |.|:|:||.||||||||||||||||||||||||||||||:||:||::|::
BPUM_1694___c      1 MTDLNFFLAFGAGFLSFISPCCLPLYPAFLSYITGVSMDEVKSEKVMLRR     50

BSNT_02967___     51 RSLFHTLCFLLGFSVIFIALGYGTSFIGSLFRDYHDAIRQIGALLIILFG    100
                     |||.|||.||:|||:||||:|:||||:|..|.|||.||||:||:|||.||
BPUM_1694___c     51 RSLLHTLFFLVGFSIIFIAIGFGTSFVGKFFDDYHQAIRQVGAILIIFFG    100

BSNT_02967___    101 FITLGVFRPEAMMKERRIHFKHKPSGFLGSVLIGMAFAAGWTPCTGPILA    150
                     |:|||||:|..:|.|:|:.||::|:||.||:||||.|||||||||||||:
BPUM_1694___c    101 FMTLGVFQPSFLMGEKRMQFKNRPAGFFGSILIGMGFAAGWTPCTGPILS    150

BSNT_02967___    151 AVITLAGTNPGSAVPYMMLYVLGFAVPFLLLSFFITKLKWIRKNQLFIMK    200
                     |||.||..||.||||||:.|||||||||.:|||||||:.||||.|..|||
BPUM_1694___c    151 AVIALASNNPESAVPYMIAYVLGFAVPFFILSFFITKMAWIRKRQQLIMK    200

BSNT_02967___    201 AGGVLMIVIGVLLFFNWMSLIIILLSDLFGGFTGF    235
                     .||::|||:|:||||:.::.|||:.|.||||||||
BPUM_1694___c    201 IGGIIMIVVGLLLFFDLLTWIIIMFSSLFGGFTGF    235


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