Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02957 and BPUM_1687

See DNA alignment / Visit BSNT_02957 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_02957___yneA.1.24716.seq
#    -bsequence pep-align/BPUM_1687___yneA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02957___yneA-BPUM_1687___yneA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02957___yneA-BPUM_1687___yneA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02957___yneA
# 2: BPUM_1687___yneA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      57/104 (54.8%)
# Similarity:    77/104 (74.0%)
# Gaps:           2/104 ( 1.9%)
# Score: 293.0
# 
#
#=======================================

BSNT_02957___      1 -MSKESIIFVGLFTVILSAVILMLSYTSSGQELNQYVKIEVQQGDTLWSI     49
                      ..||||||:|:|:.|:...:.:::.||. .:.|||||||||.|||||.:
BPUM_1687___y      1 MRLKESIIFIGVFSFIVGIFLSLIAVTSH-NDPNQYVKIEVQSGDTLWGL     49

BSNT_02957___     50 ADQVADTKKINKNDFIEWVADKNQLQTSDIQPGDELVIPLKKKHQDAYEL     99
                     ||||.|:|.|:||.||:||...|.|.:::|||||.||||:||:|...|:|
BPUM_1687___y     50 ADQVNDSKSIDKNAFIDWVTQHNDLASTEIQPGDILVIPVKKEHPFVYQL     99

BSNT_02957___    100 ATVR    103
                     |||:
BPUM_1687___y    100 ATVQ    103


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.