Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00404 and BPUM_1681
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:17
# Commandline: needle
# -asequence pep-align/BSNT_00404___mpr.1.24716.seq
# -bsequence pep-align/BPUM_1681___mpr.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00404___mpr-BPUM_1681___mpr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00404___mpr-BPUM_1681___mpr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00404___mpr
# 2: BPUM_1681___mpr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity: 91/342 (26.6%)
# Similarity: 147/342 (43.0%)
# Gaps: 68/342 (19.9%)
# Score: 271.0
#
#
#=======================================
BSNT_00404___ 1 MKLVPRFRKQWFAYLTVLCLALAAAVSFG---VPA---KAAENPQTS--- 41
.:..:.:.|.:.:.|| ||: .|:::..||
BPUM_1681___m 1 -------------MMKKVKMLLPSLLVFGALSVPSFAHAASDSVLTSDYD 37
BSNT_00404___ 42 -VSNTGK--------EGDATKNQTSKAEQVSAPYEGIGKTSKSLYGGQTE 82
|::.|| ....:.:...|.:.:|:. :|:..| .
BPUM_1681___m 38 MVTSDGKVISSSDFHNDSKSPSSFDKVDDLSST---VGEKVK-------P 77
BSNT_00404___ 83 LEKNIQTLQPSSIIGTDERTRISSTTSFPYRATVQLSIKYPNTSSTYG-- 130
|.|.::..|...:||.|.||::::|...||. ||.| .|:|
BPUM_1681___m 78 LSKYLKDSQTKVVIGDDGRTKVANTRVAPYN-----SIAY----ITFGGS 118
BSNT_00404___ 131 -CTGFLINPNTVVTAGHCVY-SQDHGWASTITAAPGRNGSSYPYGTYSGT 178
|||.||.||.::|.||||| :....:::..:..||.|.|:...|:...|
BPUM_1681___m 119 SCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSAKMT 168
BSNT_00404___ 179 MFYSVKGWTESKDTNYDYGAIKLNGSPGNTVGWYGYR-TTNSSSPVGLSS 227
.||...|:..:..:.||:..||.:.:.|||||:...| .||.: |.:.
BPUM_1681___m 169 EFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSIRQVTNLT---GTTI 215
BSNT_00404___ 228 SVTGFPCDKTFGT----MWSDTKPIRSAETYKLTYTTDTYGCQSGSPVYR 273
.::|:|.||...| .|..:..:...:|....||.||:...|||.:.
BPUM_1681___m 216 KISGYPGDKMRSTGKISQWEMSGSVTREDTNLAYYTIDTFSGNSGSAML- 264
BSNT_00404___ 274 NYSDTGQTAIAIHTNGGS--SYNLGTRVTNDVFNNIQYWANQ 313
|..|..:.:|..|.| :.|.|.:.|......|.|...|
BPUM_1681___m 265 ---DQNQQIVGVHNAGYSNGTINGGPKATAAFVEFINYAKAQ 303
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