Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03938 and BPUM_1679
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence pep-align/BSNT_03938___yrhI.1.24716.seq
# -bsequence pep-align/BPUM_1679___yrhI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03938___yrhI-BPUM_1679___yrhI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03938___yrhI-BPUM_1679___yrhI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03938___yrhI
# 2: BPUM_1679___yrhI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 83/195 (42.6%)
# Similarity: 122/195 (62.6%)
# Gaps: 14/195 ( 7.2%)
# Score: 421.5
#
#
#=======================================
BSNT_03938___ 1 ---------MIMKASVSLFTERGFDATTIPMIAERAHVGTGTIYRYFDSK 41
.|||||:.||.|||||.||:|||::||:||.||||||||||
BPUM_1679___y 1 MPAVTDKQEQIMKASLDLFIERGFDGTTMPMISKRANVGAGTIYRYFDSK 50
BSNT_03938___ 42 ETLVNVLFQESIQRFTEKLKQDVSE--LPVREGFHHVFCCLVQFTKESDY 89
|.|||:|:|.|:..|.||:..:..: ..:|..|.|||.|||.||||:..
BPUM_1679___y 51 EALVNILYQRSLSAFIEKMNTNSPDPKASIRAYFKHVFYCLVLFTKENPS 100
BSNT_03938___ 90 ALFFLETKKDAHYLNHTSKKMIENLTQMLDDYFNKGKAEGVIRSLPSNVL 139
.|:|||..:.:|||:.|||:.:::|...|...|.:||.:|:..:|....:
BPUM_1679___y 101 GLYFLEIDRRSHYLDETSKEKMQHLLHELFLIFEEGKRDGIHPNLSGRTI 150
BSNT_03938___ 140 IAIVLGAFLKIYQLVQTGDIEMDTDLITELEQCCWDAIKLHSSQK 184
::||.|||:::::.:....||...:.:.::||..|.||.:.|
BPUM_1679___y 151 LSIVFGAFVQLHKQILADGIEPTIEFLEDIEQSLWRAISVAS--- 192
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