Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05148 and BPUM_1673
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence pep-align/BSNT_05148___yvfW.1.24716.seq
# -bsequence pep-align/BPUM_1673___yvfW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05148___yvfW-BPUM_1673___yvfW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05148___yvfW-BPUM_1673___yvfW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05148___yvfW
# 2: BPUM_1673___yvfW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity: 341/479 (71.2%)
# Similarity: 399/479 (83.3%)
# Gaps: 6/479 ( 1.3%)
# Score: 1799.0
#
#
#=======================================
BSNT_05148___ 1 MAMKIGTDAFKERVSQGIDNEFMRGAVSGAQERLRTRRLEAAEELGNWEE 50
|:||||..|||||:.:|:::..||||||.|||||..|||.|:|||||||:
BPUM_1673___y 1 MSMKIGAKAFKERIGEGLEDTVMRGAVSSAQERLYERRLSASEELGNWEK 50
BSNT_05148___ 51 WRSLSEEIRQHVLENLDFYLGQLAENVAKRGGHVYFAETAEEASSYIRDV 100
||.|.||||||.|.:||.||.||:|:|:.|||||:||:|.||||:||:.|
BPUM_1673___y 51 WRELGEEIRQHTLAHLDDYLYQLSESVSARGGHVFFAKTKEEASAYIQHV 100
BSNT_05148___ 101 IQKKNGKKIVKSKSMVTEEINLNEVLEKEGCEVVETDLGEYILQIDDHDP 150
.|||..||||||||||||||.:|:.||:.||||||:||||||||:|||:|
BPUM_1673___y 101 AQKKEAKKIVKSKSMVTEEIEMNQALEEIGCEVVESDLGEYILQVDDHEP 150
BSNT_05148___ 151 PSHIVAPALHKNKEQIRDVFKERLDYQHTEKPEELVMHARAILRKKFLEA 200
||||||||||..|||||:||.|:|.|:.:|.||::....|||||:|||||
BPUM_1673___y 151 PSHIVAPALHMTKEQIREVFHEKLGYEMSETPEDMTSFVRAILREKFLEA 200
BSNT_05148___ 201 DIGITGCNFAIADTGSVSLVTNEGNGRLVSTLPKTQITVMGMERIVPSFS 250
|:|:||||||:|:|||:.|||||||..||:.:|||.|.||||||:||:..
BPUM_1673___y 201 DMGVTGCNFAVANTGSICLVTNEGNADLVTAIPKTHIAVMGMERMVPTME 250
BSNT_05148___ 251 EFEVLVSMLTRSAVGQRLTSYITALTGPKLEGEVDGPEEFHLVIVDNGRS 300
|.:|||.:|.||||||:||||| ::.|||.|.||||||||||||||||||
BPUM_1673___y 251 ELDVLVGLLCRSAVGQKLTSYI-SVVGPKGEEEVDGPEEFHLVIVDNGRS 299
BSNT_05148___ 301 NILGTEFQSVLQCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAVLSPLL 350
|||||.||.|||||||||||||||||||||||||||||.|||||||||||
BPUM_1673___y 300 NILGTAFQPVLQCIRCAACINVCPVYRHVGGHSYGSIYPGPIGAVLSPLL 349
BSNT_05148___ 351 GGYDDYKELPYASSLCAACSEACPVKIPLHELLLKHRQNIVEKEGRAPIS 400
||||||:|||:||||||||::||||||||||||:||||.|||||||||.:
BPUM_1673___y 350 GGYDDYQELPFASSLCAACTDACPVKIPLHELLIKHRQVIVEKEGRAPKA 399
BSNT_05148___ 401 EKLAMKAFGLGASSLSLYKMGSKWAPAAMTPFTEDEKISKGPGPLKNWTQ 450
|.:|||.||:|||:..:|:.|:|.||..|.....:.:||||.|||||||.
BPUM_1673___y 400 EMMAMKMFGMGASTPGMYQFGTKAAPLLMNRMASNGQISKGIGPLKNWTD 449
BSNT_05148___ 451 IRDFPAPHKSRFRDWFADRETSERTKEEQ 479
|||.|||.|.|||||| .:|.||||
BPUM_1673___y 450 IRDLPAPSKERFRDWF-----KKRQKEEQ 473
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