Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05149 and BPUM_1672

See DNA alignment / Visit BSNT_05149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence pep-align/BSNT_05149___yvfV.1.24716.seq
#    -bsequence pep-align/BPUM_1672___yvfV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05149___yvfV-BPUM_1672___yvfV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05149___yvfV-BPUM_1672___yvfV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05149___yvfV
# 2: BPUM_1672___yvfV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity:     162/238 (68.1%)
# Similarity:   193/238 (81.1%)
# Gaps:           0/238 ( 0.0%)
# Score: 874.0
# 
#
#=======================================

BSNT_05149___      1 MKVSLFVTCLVDMFQTNVGKATVELLERLGCEVDFPEGQICCGQPAYNSG     50
                     |||.||||||:|..|.||||||||:|||||.||:|||.|:||||||:|||
BPUM_1672___y      1 MKVHLFVTCLIDTMQPNVGKATVEVLERLGVEVEFPESQVCCGQPAFNSG     50

BSNT_05149___     51 YVHDAKKAMKRMIETFQDSEYVVSPSGSCTTMFREYPHLFQDDPKWADKA    100
                     |..:..||.|.||:.|:.:||||:|||||..||.|||.|.::||.|:.:|
BPUM_1672___y     51 YTKETIKAAKNMIKAFETAEYVVTPSGSCKAMFLEYPQLLKEDPVWSTQA    100

BSNT_05149___    101 QKLADKTYELTDFIVNVLGVEDVGATLHTKATLHTSCHMTRLLGVREEPM    150
                     :.||:||||||:|||::|.|.||||:|...||.||||||||||.::|.|.
BPUM_1672___y    101 EALAEKTYELTEFIVDILHVTDVGASLKGNATYHTSCHMTRLLRIKEAPF    150

BSNT_05149___    151 KLLSHVKGLQFTELPGKHNCCGFGGTFSVKMAQISEQMVDEKVECVEETG    200
                     .|||:||.|..|.||...|||||||||||||..||||||||||:.:||||
BPUM_1672___y    151 TLLSNVKDLSMTPLPRAENCCGFGGTFSVKMTPISEQMVDEKVQSIEETG    200

BSNT_05149___    201 AEVLIGADCGCLMNIGGRLDRKDKNVKVMHIAEVLNSR    238
                     |:.:||||||||:||||||:|.||.::|||||||||||
BPUM_1672___y    201 AQYIIGADCGCLLNIGGRLNRLDKPIQVMHIAEVLNSR    238


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.