Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05149 and BPUM_1672

See Amino acid alignment / Visit BSNT_05149 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence dna-align/BSNT_05149___yvfV.1.24716.seq
#    -bsequence dna-align/BPUM_1672___yvfV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05149___yvfV-BPUM_1672___yvfV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05149___yvfV-BPUM_1672___yvfV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05149___yvfV
# 2: BPUM_1672___yvfV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 760
# Identity:     492/760 (64.7%)
# Similarity:   492/760 (64.7%)
# Gaps:          86/760 (11.3%)
# Score: 1451.5
# 
#
#=======================================

BSNT_05149___      1 ATGAAAGTCTCACTT-TTTGTCACTTGTCTTGTTGATATGTTTCAAACAA     49
                     ||||||||| ||.|| ||.||.||||||.|..||||.|.|.|.||..|||
BPUM_1672___y      1 ATGAAAGTC-CATTTATTCGTTACTTGTTTAATTGACACGATGCAGCCAA     49

BSNT_05149___     50 ATGTCGGAAAAGCAACGGTTGAGCTGCTGGAGCGGCTTGGGTG-CGAGGT     98
                     ||||.|||||.||.||.||.||..||.||||..|.| |.|||| .||.||
BPUM_1672___y     50 ATGTAGGAAAGGCGACAGTGGAAGTGTTGGAAAGAC-TCGGTGTTGAAGT     98

BSNT_05149___     99 TGATTTTCCAGAAGGGCAGATTTGCTGCGGACAGCCGGCTTACAACAGCG    148
                     .||.|||||||||...||..|.||||||||||||||.||.|..|||||||
BPUM_1672___y     99 GGAATTTCCAGAATCACAAGTGTGCTGCGGACAGCCAGCCTTTAACAGCG    148

BSNT_05149___    149 GCTATGTACATGACGCCAAAAAAGCA--ATGAAACGGATGATCGAAACGT    196
                     |||||..|.|.||..|||..||||||  |..||||  ||||||.||.|.|
BPUM_1672___y    149 GCTATACAAAAGAAACCATTAAAGCAGCAAAAAAC--ATGATCAAAGCCT    196

BSNT_05149___    197 TT----CAGGATTCCGAATATGTTGTCAGTCCTTCGGGTTCCTGCACAAC    242
                     ||    |||    |.||||||||.||.|..||.||.|||||.||.|...|
BPUM_1672___y    197 TTGAAACAG----CTGAATATGTCGTGACGCCGTCAGGTTCTTGTAAGGC    242

BSNT_05149___    243 GATGTTCCGGGAGTATCCGCACCTGTTTCAGGATGATCCGAAATG-GGCC    291
                     ||||||....||.|||||.||.||.||..|.||.||.||  |.|| ||.|
BPUM_1672___y    243 GATGTTTTTAGAATATCCTCAACTTTTAAAAGAAGACCC--AGTGTGGTC    290

BSNT_05149___    292 GATAAAGCGCAAAAGCTG--------GCGGATAAAACGTATGAACTGACA    333
                     .|       ||.||||||        ||.||.|||||.||||||.|.||.
BPUM_1672___y    291 AA-------CACAAGCTGAAGCACTTGCTGAAAAAACATATGAATTAACC    333

BSNT_05149___    334 GATTTTATTG-TGA--------ACGTCCTTGGGGTAGAGGATGTCGGCGC    374
                     ||.||||||| |||        |||||        |.| |||||.|||||
BPUM_1672___y    334 GAGTTTATTGTTGATATATTACACGTC--------ACA-GATGTAGGCGC    374

BSNT_05149___    375 GACCCTTCATACAAAAGCGACCTTACATACGTCGTGCCATATGACTAGGC    424
                     ||.|||..|....||.||.||||..||.||.||.||.||||||||.||||
BPUM_1672___y    375 GAGCCTGAAAGGCAACGCAACCTATCACACATCCTGTCATATGACGAGGC    424

BSNT_05149___    425 TGCTGGGTGTTCGGGAGGAGCCGATGAAGCTGTTGAGCCATGTGAAGGGC    474
                     |||||.|..||..|||.|..||..|.|..||||||....||||.||.|..
BPUM_1672___y    425 TGCTGCGAATTAAGGAAGCCCCTTTCACACTGTTGTCAAATGTCAAAGAT    474

BSNT_05149___    475 CTGCAGTTTACAGAGCTTCCGGGCAAACATAACTGCTGCGGATTCGGAGG    524
                     .||..|.|.|||....|.|||.||..|.|.||.|||||||||||.|||||
BPUM_1672___y    475 TTGTCGATGACACCATTGCCGCGCGCAGAAAATTGCTGCGGATTTGGAGG    524

BSNT_05149___    525 AACGTTCTCCGTCAAGATGGCGCAGATTTCTGAGCAGATGGTCGATGAAA    574
                     .||.||.||.||.||.|||.|.|..|||||||||||.|||||||||||||
BPUM_1672___y    525 GACCTTTTCAGTAAAAATGACACCTATTTCTGAGCAAATGGTCGATGAAA    574

BSNT_05149___    575 AAGTCGAATGTGTGGAGGAAACGGGAGCAGAGGTGC--------TGATCG    616
                     |||||.||.|..|.|||||.||        |||.||        |.||.|
BPUM_1672___y    575 AAGTCCAAAGCATAGAGGAGAC--------AGGCGCTCAATACATCATTG    616

BSNT_05149___    617 GTGCTGACTGCGGCTGTTTGATGAATATCGG-GGGACGGCTTGACCGAA-    664
                     ||||.|||||||||||..|..|.|||||.|| ||||      |||.||| 
BPUM_1672___y    617 GTGCCGACTGCGGCTGCCTTCTCAATATTGGCGGGA------GACTGAAT    660

BSNT_05149___    665 ----AAGATAAGA---ATGTCAAAGTGATGCACATCGCCGAAGTGCTCAA    707
                         ..||||| |   || || ||||||||||.|||||.||.|||.|.||
BPUM_1672___y    661 CGTCTTGATAA-ACCCAT-TC-AAGTGATGCATATCGCAGAGGTGTTAAA    707

BSNT_05149___    708 CAGCAGATAA    717
                     .|||.|.|.|
BPUM_1672___y    708 TAGCCGCTGA    717


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