Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02253 and BPUM_1667
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence pep-align/BSNT_02253___ykoV.1.24716.seq
# -bsequence pep-align/BPUM_1667___ykoV.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02253___ykoV-BPUM_1667___ykoV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02253___ykoV-BPUM_1667___ykoV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02253___ykoV
# 2: BPUM_1667___ykoV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity: 157/297 (52.9%)
# Similarity: 215/297 (72.4%)
# Gaps: 18/297 ( 6.1%)
# Score: 835.5
#
#
#=======================================
BSNT_02253___ 1 MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIKYEKVCTN 50
|||:|||.|||||||||:||:.|||:||||||.||||.|.||.|:|||.|
BPUM_1667___y 1 MHTVWKGGISFGLVNIPVKLFTATENKDIKLRQLHKECHTPINYKKVCAN 50
BSNT_02253___ 51 CEKTLSPDEIVKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVQLQ 100
|.:.::|::|||.|||.|.|::.|.:|:|:.|::|:|||||||:|||:::
BPUM_1667___y 51 CGEEVAPEQIVKAYEYAKNKFIELDEEELEKLRKENEEKAVEIIDFVKIE 100
BSNT_02253___ 101 EIDPIYFNRSYFVGPGDNGTKAYTLLREALRSTGKIGIANMTIRSKQQLA 150
||||||:.||||:.|...|.|||:|||:||..:||||:|.:.||||:|||
BPUM_1667___y 101 EIDPIYYERSYFLSPDTGGAKAYSLLRKALEESGKIGVAKIMIRSKEQLA 150
BSNT_02253___ 151 ILRVYENCIVMESIHYPDEVRSAAHVPGVPDQSNVNDKELQTAITLIDEL 200
|:|.||:.::||:||:|||:|..:.||.:|.:.|:..|||.||:.||::|
BPUM_1667___y 151 IVRCYEHILLMETIHFPDEIRQVSDVPNIPQEENIVKKELDTALLLIEQL 200
BSNT_02253___ 201 TAEFEPEKYEDTYRQALLQRVNDKLENKETAVTPD---KAPPREDVIDLV 247
|..|:|..|:|.||:.|:..:.||:..:.| |.|: |..|..:|.||:
BPUM_1667___y 201 TTTFDPAAYQDEYREQLMNLIGDKISGEHT-VQPETTGKKDPASNVTDLM 249
BSNT_02253___ 248 SALQASIDRTRRPNRETPAAAPAQAAEPKGAGDKKRKTTRKKASGTS 294
:||||||||:: ||:| |.|..|||||..||....
BPUM_1667___y 250 AALQASIDRSK----------PAKA---KKAAPKKRKTPAKKEKNA- 282
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