Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02253 and BPUM_1667

See DNA alignment / Visit BSNT_02253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_02253___ykoV.1.24716.seq
#    -bsequence pep-align/BPUM_1667___ykoV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02253___ykoV-BPUM_1667___ykoV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02253___ykoV-BPUM_1667___ykoV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02253___ykoV
# 2: BPUM_1667___ykoV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     157/297 (52.9%)
# Similarity:   215/297 (72.4%)
# Gaps:          18/297 ( 6.1%)
# Score: 835.5
# 
#
#=======================================

BSNT_02253___      1 MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIKYEKVCTN     50
                     |||:|||.|||||||||:||:.|||:||||||.||||.|.||.|:|||.|
BPUM_1667___y      1 MHTVWKGGISFGLVNIPVKLFTATENKDIKLRQLHKECHTPINYKKVCAN     50

BSNT_02253___     51 CEKTLSPDEIVKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVQLQ    100
                     |.:.::|::|||.|||.|.|::.|.:|:|:.|::|:|||||||:|||:::
BPUM_1667___y     51 CGEEVAPEQIVKAYEYAKNKFIELDEEELEKLRKENEEKAVEIIDFVKIE    100

BSNT_02253___    101 EIDPIYFNRSYFVGPGDNGTKAYTLLREALRSTGKIGIANMTIRSKQQLA    150
                     ||||||:.||||:.|...|.|||:|||:||..:||||:|.:.||||:|||
BPUM_1667___y    101 EIDPIYYERSYFLSPDTGGAKAYSLLRKALEESGKIGVAKIMIRSKEQLA    150

BSNT_02253___    151 ILRVYENCIVMESIHYPDEVRSAAHVPGVPDQSNVNDKELQTAITLIDEL    200
                     |:|.||:.::||:||:|||:|..:.||.:|.:.|:..|||.||:.||::|
BPUM_1667___y    151 IVRCYEHILLMETIHFPDEIRQVSDVPNIPQEENIVKKELDTALLLIEQL    200

BSNT_02253___    201 TAEFEPEKYEDTYRQALLQRVNDKLENKETAVTPD---KAPPREDVIDLV    247
                     |..|:|..|:|.||:.|:..:.||:..:.| |.|:   |..|..:|.||:
BPUM_1667___y    201 TTTFDPAAYQDEYREQLMNLIGDKISGEHT-VQPETTGKKDPASNVTDLM    249

BSNT_02253___    248 SALQASIDRTRRPNRETPAAAPAQAAEPKGAGDKKRKTTRKKASGTS    294
                     :||||||||::          ||:|   |.|..|||||..||.... 
BPUM_1667___y    250 AALQASIDRSK----------PAKA---KKAAPKKRKTPAKKEKNA-    282


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