Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01158 and BPUM_1653

See DNA alignment / Visit BSNT_01158 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_01158.1.24716.seq
#    -bsequence pep-align/BPUM_1653.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01158-BPUM_1653.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01158-BPUM_1653.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01158
# 2: BPUM_1653
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:      76/162 (46.9%)
# Similarity:   112/162 (69.1%)
# Gaps:           7/162 ( 4.3%)
# Score: 414.5
# 
#
#=======================================

BSNT_01158         1 METQKMGELYQKIAEHLNEMIPSQWEKIVLYAEILDDSADIYFYFTTPNN     50
                     |||.||.|||::|||:::|:||::|.|:.||:|:|:||:::.|||.|  :
BPUM_1653          1 METNKMSELYKEIAENIHEIIPTEWHKVWLYSEVLNDSSEVAFYFCT--D     48

BSNT_01158        51 NSDYLFSHYIPEHFDVSEEIYDQLLIELQELFEELKEEFKLGNQDIWTNL    100
                     ...|.:.|.||..|.|||.:|..:||.:||||.:|:||....|:.:||..
BPUM_1653         49 EEKYFYGHNIPYDFQVSERVYVNILIRMQELFIQLREECIKHNEQVWTTA     98

BSNT_01158       101 TLKLENTGKFSIDYNYDDVLSSELDDLQRRDVWKYQNLGILPKDEDDKEF    150
                     ||:||:|||.||::.|||||:|.|:..||:.:|.|:||||.||.:..:||
BPUM_1653         99 TLELEHTGKLSIEFGYDDVLNSGLNGSQRKAIWAYENLGIYPKRKSVREF    148

BSNT_01158       151 VINYFGL-----    157
                     :..|...     
BPUM_1653        149 LEEYIKNKEENN    160


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.