Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02801 and BPUM_1636

See DNA alignment / Visit BSNT_02801 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence pep-align/BSNT_02801___glnR.1.24716.seq
#    -bsequence pep-align/BPUM_1636___glnR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02801___glnR-BPUM_1636___glnR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02801___glnR-BPUM_1636___glnR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02801___glnR
# 2: BPUM_1636___glnR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:     112/138 (81.2%)
# Similarity:   123/138 (89.1%)
# Gaps:           5/138 ( 3.6%)
# Score: 555.5
# 
#
#=======================================

BSNT_02801___      1 MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEENGLIFPARSEGNRRLFS     50
                     ||||||||||||||||||||||||||||||||||||:|||||:|||||||
BPUM_1636___g      1 MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEENGLVFPARSDGNRRLFS     50

BSNT_02801___     51 FHDVDKLLEIKHLIEQGVNMAGIKQILAKAEAE---PEQKQNEKTKKPMK     97
                     |||||||||||:||||||||||||::.||||||   .:.|..|||  ..|
BPUM_1636___g     51 FHDVDKLLEIKNLIEQGVNMAGIKKLFAKAEAEHPVSDAKTEEKT--TAK     98

BSNT_02801___     98 HDLSDDELRQLLKNELMQAGRFQRGNTFRQGDMSRFFH    135
                     |:|:|||||:|||.||:||||||:|.|||||||||||.
BPUM_1636___g     99 HNLTDDELRKLLKKELIQAGRFQQGTTFRQGDMSRFFR    136


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.