Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02798 and BPUM_1633
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence pep-align/BSNT_02798___spoVK.1.24716.seq
# -bsequence pep-align/BPUM_1633___spoVK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02798___spoVK-BPUM_1633___spoVK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02798___spoVK-BPUM_1633___spoVK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02798___spoVK
# 2: BPUM_1633___spoVK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 272/321 (84.7%)
# Similarity: 295/321 (91.9%)
# Gaps: 2/321 ( 0.6%)
# Score: 1405.0
#
#
#=======================================
BSNT_02798___ 1 MERAVTYKNNGQINIILNGQKQVLTNAEAEAEYQAALQKNEAKHGILKEI 50
||||||||||||||||||||||||.:|::||||..|||||||||.||:||
BPUM_1633___s 1 MERAVTYKNNGQINIILNGQKQVLVDADSEAEYLEALQKNEAKHSILREI 50
BSNT_02798___ 51 EKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVGKQALHMMFKGNP 100
|:||::||||:|||||||||||||||||||.|||||||||||||||||||
BPUM_1633___s 51 EREMNSLVGMDEMKRNIKEIYAWIFVNQKRQEQGLKVGKQALHMMFKGNP 100
BSNT_02798___ 101 GTGKTTVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTRDLI 150
||||||||||:||||||||||||||||||||.||||||||||||||||||
BPUM_1633___s 101 GTGKTTVARLVGKLFFEMNVLSKGHLIEAERGDLVGEYIGHTAQKTRDLI 150
BSNT_02798___ 151 KKSLGGILFIDEAYSLARGGEKDFGKEAIDTLVKHMEDKQHEFILILAGY 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1633___s 151 KKSLGGILFIDEAYSLARGGEKDFGKEAIDTLVKHMEDKQHEFILILAGY 200
BSNT_02798___ 201 SREMDHFLSLNPGLQSRFPISIDFPDYSVTQLMEIAKRMIDEREYQLSQE 250
|:||||||||||||||||||:|.||||:|.|||:|||||:.:|||..:||
BPUM_1633___s 201 SKEMDHFLSLNPGLQSRFPINISFPDYTVDQLMDIAKRMMADREYIFTQE 250
BSNT_02798___ 251 AEWKLKDYLMTVKSTTSPIKFSNGRFVRNVIEKSIRAQAMRLLMGDQYLK 300
|||||:||||.:||||||.||||||||||.|||:||.||||||:.|.|.|
BPUM_1633___s 251 AEWKLRDYLMHIKSTTSPAKFSNGRFVRNTIEKAIRTQAMRLLLVDHYDK 300
BSNT_02798___ 301 SDLMTIKSQDLSIKEEASGSA 321
.||:||||.||.:||:...
BPUM_1633___s 301 KDLLTIKSHDLQMKEDTPT-- 319
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