Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02797 and BPUM_1632

See DNA alignment / Visit BSNT_02797 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_02797___cwlC.1.24716.seq
#    -bsequence pep-align/BPUM_1632___cwlC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02797___cwlC-BPUM_1632___cwlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02797___cwlC-BPUM_1632___cwlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02797___cwlC
# 2: BPUM_1632___cwlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     162/255 (63.5%)
# Similarity:   208/255 (81.6%)
# Gaps:           3/255 ( 1.2%)
# Score: 873.0
# 
#
#=======================================

BSNT_02797___      1 MVKIFIDPGHGGSDPGATGNGLQEKTLTLQIALALRTILTNEYEGVSLLL     50
                     ||||||||||||:|.||..|||.||.:|||||:.||.:|.::|:.||:.|
BPUM_1632___c      1 MVKIFIDPGHGGTDSGAAANGLLEKNITLQIAILLRDMLISDYDDVSVRL     50

BSNT_02797___     51 SRTSDQYVSLNDRTNAANNWGADFFLSIHVNSGGGTGFESYIYPDVGAPT    100
                     ||:.||.|:|..||||||:||||:|:|||:|:|||||||||:||.|.|||
BPUM_1632___c     51 SRSIDQSVTLAQRTNAANSWGADYFVSIHINAGGGTGFESYVYPGVSAPT    100

BSNT_02797___    101 TTYQSTIHSEVIQAVDFADRGKKTANFHVLRESAMPALLTENGFIDTVSD    150
                     |||::::|.|::::||||:|||||||||||||::|||:|||||||||.:|
BPUM_1632___c    101 TTYRNSLHDEIVRSVDFANRGKKTANFHVLRETSMPAILTENGFIDTTAD    150

BSNT_02797___    151 ANKLKTSSFIQSLARGHANGLEQAFNLKKTSSLGLYKVQIGAFKVKANAD    200
                     ||||:.::|:|.:||.||.|||:||.|||.:| .|||||.||||||||||
BPUM_1632___c    151 ANKLRNATFLQGIARAHATGLEKAFQLKKKAS-NLYKVQAGAFKVKANAD    199

BSNT_02797___    201 SLASKAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAVRAKNAGFDAI    250
                     .|.:..::||||:.|:|:.|:::||.|||.:|.|||.|..|.|.||.||.
BPUM_1632___c    200 ELVATLKSKGFDAFVVLEGGMFRVQAGAFRTKQNADDLVARLKQAGHDAF    249

BSNT_02797___    251 VILES    255
                     |..  
BPUM_1632___c    250 VFQ--    252


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.