Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02797 and BPUM_1632

See Amino acid alignment / Visit BSNT_02797 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence dna-align/BSNT_02797___cwlC.1.24716.seq
#    -bsequence dna-align/BPUM_1632___cwlC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02797___cwlC-BPUM_1632___cwlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02797___cwlC-BPUM_1632___cwlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02797___cwlC
# 2: BPUM_1632___cwlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 810
# Identity:     531/810 (65.6%)
# Similarity:   531/810 (65.6%)
# Gaps:          93/810 (11.5%)
# Score: 1582.5
# 
#
#=======================================

BSNT_02797___      1 ATGGTTAAAATTTTTATTGATCCTGGCCATGGCGGGTCTGATCCAGGCGC     50
                     |||||.||||||||||||||||||||||||||.||..|.|||.|.||.||
BPUM_1632___c      1 ATGGTGAAAATTTTTATTGATCCTGGCCATGGAGGAACAGATTCTGGAGC     50

BSNT_02797___     51 AACAGGTAATGGCCTTCAGGAAAAAACGTTAACCCTGCAAATCGC---TT     97
                     ..|.|.||||||.|||..|||.||||...|.||.||||||||.||   ||
BPUM_1632___c     51 TGCTGCTAATGGACTTTTGGAGAAAAATATCACACTGCAAATTGCGATTT    100

BSNT_02797___     98 TAGCCTTACGTACGATA--TTAACTAATGAATATGAAGGCGTTTC--TCT    143
                     ||   ||  |...||||  ||.|.||.|||.|||||.|.||||||  ||.
BPUM_1632___c    101 TA---TT--GAGAGATATGTTGATTAGTGATTATGATGACGTTTCCGTCC    145

BSNT_02797___    144 GCTGCTGAGCCGGACAAGCGACCAATATGTCAGCTTAAACGACCGGACAA    193
                     |||  |.||.||..|.|..|||||||..||||..||...|.|.||.||||
BPUM_1632___c    146 GCT--TAAGTCGTTCGATTGACCAATCCGTCACTTTGGCCCAGCGTACAA    193

BSNT_02797___    194 ATGCCGCAAATAACTGGGGAGCAGATTTCTTTTTGTCCATTCACGTTAAT    243
                     ||||.|||||.|.|||||||||.||.|..||..||||.|||||..|||||
BPUM_1632___c    194 ATGCAGCAAACAGCTGGGGAGCTGACTATTTCGTGTCTATTCATATTAAT    243

BSNT_02797___    244 TCCGGGGGAGGCACAGGTTTTGAAAGCTATATTTATCCAGATGTAGGAGC    293
                     .|.||.||||||||||||||||||||||||.|.|||||.|..||...|||
BPUM_1632___c    244 GCAGGCGGAGGCACAGGTTTTGAAAGCTATGTGTATCCTGGCGTTTCAGC    293

BSNT_02797___    294 CCCGACGACGACTTATCAATCGACAATTCACTCTGAAGTGATACAA----    339
                     .|||||.||.||.||||     .||||||.|| |.|  ||||..||    
BPUM_1632___c    294 ACCGACTACCACGTATC-----GCAATTCCCT-TCA--TGATGAAATTGT    335

BSNT_02797___    340 --GCT--GTCGACTTTGCCGATCGCGGCAAAAAAACAGCGAACTTCCACG    385
                       |||  ||.||.||||||.|.||||||||.|||||||||||||||||||
BPUM_1632___c    336 TCGCTCGGTGGATTTTGCCAACCGCGGCAAGAAAACAGCGAACTTCCACG    385

BSNT_02797___    386 TCCTAAGGGAGTCGGCAATGCCTGCCCTCTTGACCGAGAACGGCTTCATT    435
                     |.||..|.||..|..|.|||||.||..|.||.||.|||||.||.|||||.
BPUM_1632___c    386 TTCTTCGAGAAACTTCTATGCCCGCTATTTTAACAGAGAATGGTTTCATC    435

BSNT_02797___    436 GATACCGTTT----CCGATGCAAATAAGCT---GAAAACGAGCAGTTTTA    478
                     |||||    |    |.||||||||||||||   .||..|||.|   ||..
BPUM_1632___c    436 GATAC----TACAGCTGATGCAAATAAGCTTCGCAACGCGACC---TTCC    478

BSNT_02797___    479 TTCAAAGCTTAGCGAGAGGACATGCAAACGGGCTGGAGCAAGCCTTTAAC    528
                     |||||.||.|.||..|.|..|||||.|..||..|.|||.||||.|||.|.
BPUM_1632___c    479 TTCAAGGCATCGCTCGCGCTCATGCCACTGGATTAGAGAAAGCTTTTCAG    528

BSNT_02797___    529 CTTAAAAAGACTTCCAG----CTTAGGGTTATATAAGGTTCAAATCGGC-    573
                     ||.|||||.|...|.||    |||       |||||.||.||    ||| 
BPUM_1632___c    529 CTGAAAAAAAAAGCAAGTAATCTT-------TATAAAGTACA----GGCT    567

BSNT_02797___    574 ---GCATTTAAAGTCAAAGCGAATGCCGACTCGCTCGCA--AGTA---AA    615
                        ||.||.||.||.|||||.|||||.||      .|.|  ||||   |.
BPUM_1632___c    568 GGAGCTTTCAAGGTGAAAGCCAATGCAGA------TGAATTAGTAGCCAC    611

BSNT_02797___    616 GCCG-AAGCCAAAGGTTTTGAC----TCGATTGTCCTTTTAAAGGACGGA    660
                     ||.| ||.|||||||.||||||    ||| |||   |.|||.|||.|||.
BPUM_1632___c    612 GCTGAAATCCAAAGGCTTTGACGCCTTCG-TTG---TATTAGAGGGCGGC    657

BSNT_02797___    661 TTATACAAAGTGCAGATTGGCGCATTTTCATCCAAAG-ACAATGCAGACA    709
                     .|.|.|..||||||....||.|| |||||.|.||||| |.|||||.||..
BPUM_1632___c    658 ATGTTCCGAGTGCAAGCCGGGGC-TTTTCGTACAAAGCAAAATGCGGATG    706

BSNT_02797___    710 CCCTGGCTGTCAGAGCGAAAAATGCCGGCTTTGACGCTATT-GTGATCCT    758
                     .|||.|..|..|||..||||.|.|||||...|||||| ||| ||..|||.
BPUM_1632___c    707 ACCTCGTCGCAAGATTGAAACAGGCCGGTCATGACGC-ATTCGTTTTCCA    755

BSNT_02797___    759 AGAATCATAG    768
                     |.||      
BPUM_1632___c    756 ATAA------    759


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02797 and BPUM_1632

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
