Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02796 and BPUM_1631
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence pep-align/BSNT_02796___ymaB.1.24716.seq
# -bsequence pep-align/BPUM_1631___ymaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02796___ymaB-BPUM_1631___ymaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02796___ymaB-BPUM_1631___ymaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02796___ymaB
# 2: BPUM_1631___ymaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 144/206 (69.9%)
# Similarity: 173/206 (84.0%)
# Gaps: 1/206 ( 0.5%)
# Score: 743.0
#
#
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BSNT_02796___ 1 MGKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRR 50
||||||:||||||..||:.|:|.|.||.||:..:..||.:||..:.:|||
BPUM_1631___y 1 MGKMDEIILVAPRTRVFQNETLAFNGVNSEEETINTIMKEIEEHFEQMRR 50
BSNT_02796___ 51 GDAEEDPRFKQPIPYVVIKREDEVFLYERLAGGGESRLHNKLSLGFGGHM 100
|||||:|.||||||||||||||||::||||.||||:|||:||||||||||
BPUM_1631___y 51 GDAEENPDFKQPIPYVVIKREDEVYVYERLHGGGETRLHHKLSLGFGGHM 100
BSNT_02796___ 101 NAIEGAASFAEVLKLNTDRELEEELQINEEDKQAIVTLGLINDDENSVGK 150
|.||| .:|||:||.||||||:|||.|.|.||..:.||||||||:||||:
BPUM_1631___y 101 NFIEG-KNFAEILKENTDRELDEELSIQEADKLEMKTLGLINDDDNSVGR 149
BSNT_02796___ 151 VHIGILSALQLKPGAQVEVKEKEQIAGKWMKVSELKQDDIYNRLETWSQF 200
||||:||||:|.|||.|||||.:||:|||||.|:||:.:.::||||||||
BPUM_1631___y 150 VHIGLLSALELSPGAHVEVKETDQISGKWMKASDLKKPEYFDRLETWSQF 199
BSNT_02796___ 201 VVDILE 206
||:||.
BPUM_1631___y 200 VVNILA 205
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