Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02796 and BPUM_1631

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_02796___ymaB.1.24716.seq
#    -bsequence pep-align/BPUM_1631___ymaB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02796___ymaB-BPUM_1631___ymaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02796___ymaB-BPUM_1631___ymaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02796___ymaB
# 2: BPUM_1631___ymaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity:     144/206 (69.9%)
# Similarity:   173/206 (84.0%)
# Gaps:           1/206 ( 0.5%)
# Score: 743.0
# 
#
#=======================================

BSNT_02796___      1 MGKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRR     50
                     ||||||:||||||..||:.|:|.|.||.||:..:..||.:||..:.:|||
BPUM_1631___y      1 MGKMDEIILVAPRTRVFQNETLAFNGVNSEEETINTIMKEIEEHFEQMRR     50

BSNT_02796___     51 GDAEEDPRFKQPIPYVVIKREDEVFLYERLAGGGESRLHNKLSLGFGGHM    100
                     |||||:|.||||||||||||||||::||||.||||:|||:||||||||||
BPUM_1631___y     51 GDAEENPDFKQPIPYVVIKREDEVYVYERLHGGGETRLHHKLSLGFGGHM    100

BSNT_02796___    101 NAIEGAASFAEVLKLNTDRELEEELQINEEDKQAIVTLGLINDDENSVGK    150
                     |.||| .:|||:||.||||||:|||.|.|.||..:.||||||||:||||:
BPUM_1631___y    101 NFIEG-KNFAEILKENTDRELDEELSIQEADKLEMKTLGLINDDDNSVGR    149

BSNT_02796___    151 VHIGILSALQLKPGAQVEVKEKEQIAGKWMKVSELKQDDIYNRLETWSQF    200
                     ||||:||||:|.|||.|||||.:||:|||||.|:||:.:.::||||||||
BPUM_1631___y    150 VHIGLLSALELSPGAHVEVKETDQISGKWMKASDLKKPEYFDRLETWSQF    199

BSNT_02796___    201 VVDILE    206
                     ||:||.
BPUM_1631___y    200 VVNILA    205


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