Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02796 and BPUM_1631
See
Amino acid alignment /
Visit
BSNT_02796 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_02796___ymaB.1.24716.seq
# -bsequence dna-align/BPUM_1631___ymaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02796___ymaB-BPUM_1631___ymaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02796___ymaB-BPUM_1631___ymaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02796___ymaB
# 2: BPUM_1631___ymaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 634
# Identity: 444/634 (70.0%)
# Similarity: 444/634 (70.0%)
# Gaps: 29/634 ( 4.6%)
# Score: 1409.5
#
#
#=======================================
BSNT_02796___ 1 ATGGGAAAAATGGACGAAATGATTTTAGTTGCCCCGCGCGATGATGTGTT 50
||||||||||||||.|||||.||..|||||||.||||||..|...|||||
BPUM_1631___y 1 ATGGGAAAAATGGATGAAATCATACTAGTTGCACCGCGCACTCGCGTGTT 50
BSNT_02796___ 51 TAAGAAAGAAA-GCTTAACCTTCCAGGGCGTGTACAGTGAAGATAGCAGA 99
..|.||.|||| |||| .|.||..|.||.|||.|.||||||| ||.|.|
BPUM_1631___y 51 CCAAAATGAAACGCTT-GCGTTTAATGGTGTGAATAGTGAAG--AGGAAA 97
BSNT_02796___ 100 GTAGC--CGAAATCATGGCTCAGATTGAAGCGGCCTATCGTG-AAATGAG 146
..|.| |..|||.|||....|.||.||||.|..|| |||.| |.|||.|
BPUM_1631___y 98 CAATCAACACAATTATGAAAGAAATCGAAGAGCACT-TCGAGCAGATGCG 146
BSNT_02796___ 147 AAGAGGGGACGCAGAAGAAGATCCGCGTTTCAAGCAGCCGATACCTTATG 196
.|||||.||.||.||||||.||||....||||||||||||||.|||||||
BPUM_1631___y 147 TAGAGGCGATGCGGAAGAAAATCCTGACTTCAAGCAGCCGATTCCTTATG 196
BSNT_02796___ 197 TCGTCATTAAGCGTGAAGATGAAGTTTTTCTTTACGAGCGGCTGGCTGGC 246
||||.|||||||||||.||.|||||.|.|.|.||.||..||||...|||.
BPUM_1631___y 197 TCGTGATTAAGCGTGAGGACGAAGTGTATGTATATGAAAGGCTTCATGGT 246
BSNT_02796___ 247 GGCGGTGAATCACGACTGCACAACAAGCTTTCTCTCGGCTTTGGCGGTCA 296
||.||.||..|.|||.||||..|.|||.|.|||||.||||||||.|||||
BPUM_1631___y 247 GGGGGAGAGACTCGATTGCATCATAAGTTATCTCTTGGCTTTGGTGGTCA 296
BSNT_02796___ 297 TATGAACGCCATCGAAGGGGCAGCTTCA-----TTTGCTG-AAGTCTTAA 340
.|||||...||||||||| || ||||||| ||.|||.||
BPUM_1631___y 297 CATGAATTTCATCGAAGG--------CAAAAACTTTGCTGAAATTCTAAA 338
BSNT_02796___ 341 AGCTGAACACAGACCGTGAGCTTGAGGAAGAAC-TGCAAATAAATGAAGA 389
|| ..||.||.||.||||||||.||.||.|||| |.|.|.|.|| ||||.
BPUM_1631___y 339 AG-AAAATACGGATCGTGAGCTAGACGAGGAACTTTCTATTCAA-GAAGC 386
BSNT_02796___ 390 AGATAAACAGGCGATTGTCACACTGGGATTGATCAATGATGATGAAAATA 439
|||.||.|..|.|||....||.||.|||||.||.|||||||||||.||.|
BPUM_1631___y 387 AGACAAGCTTGAGATGAAAACCCTTGGATTAATTAATGATGATGACAACA 436
BSNT_02796___ 440 GTGTTGGCAAAGTGCATATCGGTATTCTT-TCTGCGCTTCAATTAAAGCC 488
||||.|||...|||||.||.|| |.|.|| ||.||||||.|||||...||
BPUM_1631___y 437 GTGTCGGCCGTGTGCACATTGG-ACTGTTATCAGCGCTTGAATTATCTCC 485
BSNT_02796___ 489 TGGCGCACAAGTGGAAGTGAAGGAGAAAGAACAAATTGCGGGTAAATGGA 538
.||.||.||.||.||||||||.||.|.|||.|||||..|.||.|||||||
BPUM_1631___y 486 AGGTGCTCATGTAGAAGTGAAAGAAACAGATCAAATCTCAGGAAAATGGA 535
BSNT_02796___ 539 TGAAAGTTTCTGAATTAAAACAGGATGACAT-CTACAACCGTCTGGAAAC 587
||||||..||.||.||.|||.||..||| || ||.|.|.||.||.|||||
BPUM_1631___y 536 TGAAAGCATCCGATTTGAAAAAGCCTGA-ATACTTCGATCGACTTGAAAC 584
BSNT_02796___ 588 ATGGTCACAGTTTGTTGTTGATATTCTTGAATAA 621
.|||||.||.|||||.||..|||||.|.|.||||
BPUM_1631___y 585 GTGGTCTCAATTTGTCGTGAATATTTTAGCATAA 618
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.