Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02788 and BPUM_1624

See DNA alignment / Visit BSNT_02788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_02788___miaA.1.24716.seq
#    -bsequence pep-align/BPUM_1624___miaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02788___miaA-BPUM_1624___miaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02788___miaA-BPUM_1624___miaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02788___miaA
# 2: BPUM_1624___miaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity:     211/331 (63.7%)
# Similarity:   250/331 (75.5%)
# Gaps:          17/331 ( 5.1%)
# Score: 1116.0
# 
#
#=======================================

BSNT_02788___      1 -------------MNNTKQPVVILVGPTAVGKTNLSIQLAKSLNAEIISG     37
                                  |..|||||::||||||||||.|||.:||:.|.|||||
BPUM_1624___m      1 MLYCRQFVKESDVMKKTKQPVIVLVGPTAVGKTKLSIHIAKAYNGEIISG     50

BSNT_02788___     38 DSMQIYKGMDIGTAKITEQEMEGVPHHLIDILDPQDSFSTADYQSLVRNK     87
                     |||||||||||||||||.:||:|||||||||.:|.:|||||::|.|||.|
BPUM_1624___m     51 DSMQIYKGMDIGTAKITSEEMDGVPHHLIDIKEPDESFSTAEFQQLVRMK    100

BSNT_02788___     88 ISEIANRGKLPMIVGGTGLYIQSVLYDYTFTEEANDPVFRESMQVAAERE    137
                     |.|||.|||.|||||||||||||||||||||:|.:||.|||.|.:..::.
BPUM_1624___m    101 IKEIAARGKTPMIVGGTGLYIQSVLYDYTFTDEKSDPAFREEMALFEQQH    150

BSNT_02788___    138 GADFLHAKLAAADPEAAAAIHPNNTRRVIRALEILHTSGKTMSQHLKEQK    187
                     |...||.||.|.||:||.||||||.||||||||::||:|:.||:.....:
BPUM_1624___m    151 GPLQLHEKLKAVDPDAAKAIHPNNVRRVIRALEVIHTTGQKMSEMQNGHQ    200

BSNT_02788___    188 RELLYNAVLIGLTMDRDTLYERINQRVDLMMESGLLPEVKRLYDKNVRDC    237
                     ...||:...|||.|||:.|||||:||:|:|::.||:.||..||...::||
BPUM_1624___m    201 EVPLYDTAFIGLKMDRELLYERIHQRIDMMIDEGLIEEVSALYQSGLKDC    250

BSNT_02788___    238 QSIQAIGYKELYAYFDGFVTLSDAVEQLKQNSRRYAKRQLTWFRNKMQVT    287
                     ||:|||||||||.||.|..:|.:|::|||||||||||||.|||||||.||
BPUM_1624___m    251 QSVQAIGYKELYTYFQGDCSLDEAIQQLKQNSRRYAKRQFTWFRNKMDVT    300

BSNT_02788___    288 WFDMTPPVDMELKKKEIFTHIAGKLEL----    314
                     |||||||.....||:|||.:|||||.|    
BPUM_1624___m    301 WFDMTPPCHFSDKKEEIFAYIAGKLGLKAKL    331


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