Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02788 and BPUM_1624

See Amino acid alignment / Visit BSNT_02788 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_02788___miaA.1.24716.seq
#    -bsequence dna-align/BPUM_1624___miaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02788___miaA-BPUM_1624___miaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02788___miaA-BPUM_1624___miaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02788___miaA
# 2: BPUM_1624___miaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1055
# Identity:     666/1055 (63.1%)
# Similarity:   666/1055 (63.1%)
# Gaps:         169/1055 (16.0%)
# Score: 2077.5
# 
#
#=======================================

BSNT_02788___      1 ---------------------------------------TTGAATAATAC     11
                                                            .||||.||.||
BPUM_1624___m      1 ATGCTATACTGTAGGCAGTTTGTAAAAGAGAGTGATGTTATGAAAAAAAC     50

BSNT_02788___     12 GAAGCAGCCCGTTGTCATTTTAGTCGGACCGACGGCAGTGGGGAAAACCA     61
                     |||.||.||.||..|..|.|||||.||||||||.||.||.||.|||||.|
BPUM_1624___m     51 GAAACAACCAGTGATTGTATTAGTAGGACCGACCGCTGTCGGCAAAACAA    100

BSNT_02788___     62 ATTTAAGTATTCAGCTAGCCAAATCCTTAAACGCAGAAATTATCAGCGGA    111
                     |..|.||.|||||..||||.|||.|.|..||.|.|||||||||||||||.
BPUM_1624___m    101 AACTGAGCATTCATATAGCAAAAGCATATAATGGAGAAATTATCAGCGGT    150

BSNT_02788___    112 GATTCGATGCAGATTTATAAAGGGATGGATATTGGAACAGCTAAAATTAC    161
                     |||||.|||||||||||.|||||.|||||.|||||||||||||||||.||
BPUM_1624___m    151 GATTCTATGCAGATTTACAAAGGAATGGACATTGGAACAGCTAAAATCAC    200

BSNT_02788___    162 C---GAACAGGAGATGGAGGGAGTGCCCCATCATCTGATTGACATTTTAG    208
                     |   |||   ||.|||||.||.||.||.||.||..|.|||||.|||..||
BPUM_1624___m    201 CTCTGAA---GAAATGGATGGTGTCCCGCACCACTTAATTGATATTAAAG    247

BSNT_02788___    209 ATCCCCAAGACTCTTTCTCTACTGCCGATTATCA-AAGCTTAGTAAGAAA    257
                     |.||..|.||.|||||.|||||.||.||.|.||| .||| ||||..|.|.
BPUM_1624___m    248 AGCCGGACGAATCTTTTTCTACAGCTGAATTTCAGCAGC-TAGTCCGTAT    296

BSNT_02788___    258 TAAAATCAGCGAGATTGCAAATAGA-GGAAAGCTTCCGATGATTGTCGGT    306
                     .|||||||..||||||||...|||| |||||.| .||.|||||||||||.
BPUM_1624___m    297 GAAAATCAAAGAGATTGCCGCTAGAGGGAAAAC-ACCCATGATTGTCGGC    345

BSNT_02788___    307 GGTACAGGGCTTTATATACAATCTGTGCTTTACGATTATACATTTACGGA    356
                     ||.|||||..|.|||||.||||||||..|.||.|||||.||||||||.||
BPUM_1624___m    346 GGAACAGGTTTGTATATTCAATCTGTTTTATATGATTACACATTTACCGA    395

BSNT_02788___    357 AGAGGCAAATGATCCCGTGTTTCGAGAGAGCATGCAAGTGGCCGCT----    402
                     .||...||.|||.||.|..|||.|||| ||     ||.||| ||||    
BPUM_1624___m    396 TGAAAAAAGTGACCCTGCTTTTAGAGA-AG-----AAATGG-CGCTTTTT    438

BSNT_02788___    403 ---GAGCGGGAAGGCGCTGACTTTCTTCATGCCAAAC---TTGCT----G    442
                        .|||.|.|.|||.|      .||||| ||.|.||   ..|||    |
BPUM_1624___m    439 GAACAGCAGCATGGCCC------CCTTCA-GCTACACGAAAAGCTAAAGG    481

BSNT_02788___    443 CAGCAGATCCCGAGGCAGCAGCTGCGATTCATCCGAATAATACAAGAAGA    492
                     |.|.|||.||.||.||.|||...||.|||||||||||||||....|..|.
BPUM_1624___m    482 CGGTAGACCCTGATGCTGCAAAAGCCATTCATCCGAATAATGTCCGCCGC    531

BSNT_02788___    493 GTCATTCGCGCACTGGAAATTTTACATACGTCTGG--AAAAACGATGTCC    540
                     ||.||.||.||.||||||.|..|.|||||..|.||  |.|||  ||||| 
BPUM_1624___m    532 GTGATCCGGGCGCTGGAAGTGATCCATACAACAGGTCAGAAA--ATGTC-    578

BSNT_02788___    541 CAGCATTTGAAGGAA---CAAA------AACGAGAA---CTTCTGTACAA    578
                                ||||   ||||      |.|.||||   |.|||.||..|
BPUM_1624___m    579 -----------GGAAATGCAAAATGGTCATCAAGAAGTTCCTCTTTATGA    617

BSNT_02788___    579 TGCAGTGTTAATTGGCCTGACAATGGATAGAGACACGCTT---TACGAAA    625
                     |.|||..||.|||||.||||.||||||..||||   ||||   |||||..
BPUM_1624___m    618 TACAGCCTTCATTGGGCTGAAAATGGACCGAGA---GCTTTTGTACGAGC    664

BSNT_02788___    626 GAATTAATCAGCGGGTCGATTTGATGATGGAGTCAGGCCTTCTTCCGGAA    675
                     |.|||.|.||..|..|.|||.|||||||.||...||||.|..||..||||
BPUM_1624___m    665 GCATTCACCAAAGAATTGATATGATGATAGATGAAGGCTTAATTGAGGAA    714

BSNT_02788___    676 GTGAAACGC---TTATACGACAA----GAACGTGAGAGACTGTCAATCAA    718
                     ||| |.|||   ||||    |||    |  |.|||..||.||||||||..
BPUM_1624___m    715 GTG-AGCGCACTTTAT----CAATCTGG--CTTGAAGGATTGTCAATCGG    757

BSNT_02788___    719 TACAGGCGATAGGCTATAAAGAGCTGTATGCATATTT------TGACGGT    762
                     |.||.|||||.||.|||||||||.|||||.|.|||||      ||||.|.
BPUM_1624___m    758 TTCAAGCGATTGGTTATAAAGAGTTGTATACGTATTTCCAAGGTGACTGC    807

BSNT_02788___    763 TTTGTGACACTTTCCGATGCTGTCGAACAGC---TAAAGCAGAACTCGAG    809
                     |      ||||   .||||..|.|...||||   |||||||.||.||..|
BPUM_1624___m    808 T------CACT---GGATGAAGCCATTCAGCAATTAAAGCAAAATTCCCG    848

BSNT_02788___    810 GCGGTATGCGAAACGCCAGCTGACGTGGTTTCGCAACAAAATGCAGGTCA    859
                     ..|.||||||||.||.|||.|.||||||||.||.||.||||||.|.||||
BPUM_1624___m    849 TAGATATGCGAAGCGTCAGTTCACGTGGTTCCGTAATAAAATGGATGTCA    898

BSNT_02788___    860 CATGGTTCGATATGACACCGCCTGTTGATATGGAGCT-------GAAAAA    902
                     |.||||||||.||||||||||||       ||...||       .|||||
BPUM_1624___m    899 CTTGGTTCGACATGACACCGCCT-------TGCCACTTTTCAGACAAAAA    941

BSNT_02788___    903 AAAGGAAATTTTCACACATATAGCAGGAAAACTCGAACTTTAA-------    945
                     |.|||||||||||.||.|||||||||||||.||.|.||||.||       
BPUM_1624___m    942 AGAGGAAATTTTCGCATATATAGCAGGAAAGCTTGGACTTAAAGCGAAAC    991

BSNT_02788___    945 -----    945
                          
BPUM_1624___m    992 TGTAG    996


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