Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02783 and BPUM_1618

See DNA alignment / Visit BSNT_02783 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence pep-align/BSNT_02783___ymaD.1.24716.seq
#    -bsequence pep-align/BPUM_1618___ymaD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02783___ymaD-BPUM_1618___ymaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02783___ymaD-BPUM_1618___ymaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02783___ymaD
# 2: BPUM_1618___ymaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     110/150 (73.3%)
# Similarity:   123/150 (82.0%)
# Gaps:           1/150 ( 0.7%)
# Score: 566.0
# 
#
#=======================================

BSNT_02783___      1 MADHHFYLKANWPGNRNDVGTIESGNLITSISIPKEMDGPGEGTNPDEML     50
                     ||.|||:|:|:|||.|||||||....|.|.|||||||||||.||||||||
BPUM_1618___y      1 MAQHHFHLQASWPGLRNDVGTISCEQLKTKISIPKEMDGPGIGTNPDEML     50

BSNT_02783___     51 LGAAATCYIITLAAMMERSGLEKEDLQMESEGIVDVTKGVFTYKKIIHRP    100
                     |||||||||||||||||||.||||||.|.||.:||||.|||||:||||||
BPUM_1618___y     51 LGAAATCYIITLAAMMERSQLEKEDLTMSSEAVVDVTNGVFTYEKIIHRP    100

BSNT_02783___    101 SVVLKHDASQDDVALAHKLCKKAESSCMISRAIQGNVVLQLEASVKLGGE    150
                     .::||..||..|:.||.||..|||||||||||:||||.:.||.:::||| 
BPUM_1618___y    101 VIILKASASPQDIELARKLAHKAESSCMISRAVQGNVDISLEETIQLGG-    149


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