Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02782 and BPUM_1617
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_02782___ymaC.1.24716.seq
# -bsequence pep-align/BPUM_1617.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02782___ymaC-BPUM_1617.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02782___ymaC-BPUM_1617.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02782___ymaC
# 2: BPUM_1617
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity: 126/249 (50.6%)
# Similarity: 171/249 (68.7%)
# Gaps: 19/249 ( 7.6%)
# Score: 616.0
#
#
#=======================================
BSNT_02782___ 1 MRRFLLNVILVLAIVLFLRYVHYSLEPEPSNQP------------DTYSN 38
|::|.. ::|:|||.. .|:|:::.:..::| |.|.|
BPUM_1617 1 MKKFFA-LLLLLAIGW---GVYYTMQAQEHDEPVSSGGEDESGSTDIYRN 46
BSNT_02782___ 39 FSSLAENESPADYDISYNEKKGSKVLIMSPHGGRIEGGVSELVRYFNNEY 88
|..|.||||.:.|.|:.|...||::|:||||||||||||||:|.:|:|::
BPUM_1617 47 FKELEENESTSSYQITANPVPGSRLLVMSPHGGRIEGGVSEIVHFFDNDF 96
BSNT_02782___ 89 STYLFEGLKSHDNQTLHITSTNFDEPLAKKKIKEHQYVVAFHGYKGEN-- 136
||||||||:.:.:: ||:||||||||:...:.|.|.|::|.||||||.
BPUM_1617 97 STYLFEGLRENASE-LHVTSTNFDEPVGVAQAKAHDYILAVHGYKGEEGI 145
BSNT_02782___ 137 KNTLVGGTDRKRAKMIVRALERRGFSAELASSKSGLAGLNAENINNQGET 186
.:|||||||..||:.||.:|||.|||||||.:.:.|:|.:..||||..:|
BPUM_1617 146 DHTLVGGTDYDRAEKIVNSLERNGFSAELAVAHATLSGTSNHNINNLTKT 195
BSNT_02782___ 187 GLSIQLEISREQREAFFDDFYYKNRKYTKNSEFYAYVSAIKGVLEKEYL 235
|.|:||||||.||||.||.|.::.|..|||..||.||.||:.||::||.
BPUM_1617 196 GQSVQLEISRSQREALFDSFDFRRRSSTKNETFYRYVRAIRTVLDEEYT 244
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