Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02780 and BPUM_1616
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_02780.1.24716.seq
# -bsequence pep-align/BPUM_1616___aprX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02780-BPUM_1616___aprX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02780-BPUM_1616___aprX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02780
# 2: BPUM_1616___aprX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 442
# Identity: 263/442 (59.5%)
# Similarity: 321/442 (72.6%)
# Gaps: 53/442 (12.0%)
# Score: 1431.0
#
#
#=======================================
BSNT_02780 0 -------------------------------------------------- 0
BPUM_1616___a 1 MFGFSMVQMVRTHASKLDQPLRETVLHLYKPFKWTPCFLHRYFEGRLKKR 50
BSNT_02780 1 --MSVIIEFEEGCHETGFQMAGEVLQKEKRSKLKSRFNKINCCSAEVTPS 48
:.|||||:|...|.|.|...::::|.:::.:|..|:.|:||:|::||:
BPUM_1616___a 51 KKLRVIIEFKEDAVEAGIQSTKQLMKKSRKTNIKKHFSHIDCCAADLTPA 100
BSNT_02780 49 ALHSLLSECSNIRKVYLNREVKALLDTATEASHAKEVVRNGQTLTGKGVT 98
||..||:...:|||:||:|||.||||.||:||||.||:|||..|||:|:|
BPUM_1616___a 101 ALEELLANGEHIRKIYLDREVHALLDVATQASHADEVIRNGTALTGEGIT 150
BSNT_02780 99 VAVVDTGIYPHPDLEGRIIGFADMVNQKTEPYDDNGHGTHCAGDVASSGA 148
|||:|||||||.|::|||..|.|:|.||.:||||||||||||||||..||
BPUM_1616___a 151 VAVIDTGIYPHEDVDGRIRDFVDLVKQKKKPYDDNGHGTHCAGDVAGDGA 200
BSNT_02780 149 SSSGQYRGPAPEANLIGVKVLNKQGSGTLADIIEGVEWCIQYNEDNPDEP 198
:|.|.|:||||:|:|||||||||||:|:|:.||||||||||:|||:||:|
BPUM_1616___a 201 ASDGLYKGPAPKAHLIGVKVLNKQGAGSLSTIIEGVEWCIQFNEDHPDDP 250
BSNT_02780 199 IDIISMSLGGDALRYDHEQEDPLVRAVEEAWSAGIVVCVAAGNSGPDSQT 248
|.|:||||||||.|||.||:||:||||..||..|||||||||||||:|||
BPUM_1616___a 251 IHIMSMSLGGDAQRYDDEQDDPMVRAVNAAWDQGIVVCVAAGNSGPNSQT 300
BSNT_02780 249 IASPGVSEKVITVGALDDNNTASSDDDTVASFSSRGPTVYGKEKPDILAP 298
||||.||:|||||||.||.||..|:||.||.||||||||||:.|||||||
BPUM_1616___a 301 IASPAVSQKVITVGAFDDRNTPESNDDIVAPFSSRGPTVYGETKPDILAP 350
BSNT_02780 299 GVNIISLRSPNSYIDKLQKSSRVGSQYFTMSGTSMATPICAGIAALILQH 348
||||:|||||.|::|||.|||||...|.|:|||||||||||||.||||:|
BPUM_1616___a 351 GVNIVSLRSPRSFLDKLDKSSRVDDDYTTLSGTSMATPICAGICALILEH 400
BSNT_02780 349 NPDLTPDEVKELLKNGTDKWKDEDPNIYGAGAVNAENSVPGQ 390
:||.||||||.:||..|.||..:||.||||||::||.::..
BPUM_1616___a 401 SPDSTPDEVKTMLKENTSKWSGDDPTIYGAGAIDAEKAIKE- 441
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