Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02754 and BPUM_1608

See DNA alignment / Visit BSNT_02754 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_02754___mutS.1.24716.seq
#    -bsequence pep-align/BPUM_1608___mutS1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02754___mutS-BPUM_1608___mutS1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02754___mutS-BPUM_1608___mutS1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02754___mutS
# 2: BPUM_1608___mutS1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 864
# Identity:     687/864 (79.5%)
# Similarity:   756/864 (87.5%)
# Gaps:          12/864 ( 1.4%)
# Score: 3467.0
# 
#
#=======================================

BSNT_02754___      1 MAGYTPMIQQYLKIKAEHQDAFLFFRLGDFYEMFFEDAKKASQELEITLT     50
                     ||.|||||||||.||||:|||||||||||||||||:|||:||||||||||
BPUM_1608___m      1 MASYTPMIQQYLNIKAEYQDAFLFFRLGDFYEMFFDDAKEASQELEITLT     50

BSNT_02754___     51 SRDGGAAEKIPMCGVPYHSASAYIEQLIKKGYKVAICEQTEDPKAAKGVV    100
                     |||||.   |||||||||||||||||||.||||||||||.||||.|||||
BPUM_1608___m     51 SRDGGT---IPMCGVPYHSASAYIEQLISKGYKVAICEQVEDPKTAKGVV     97

BSNT_02754___    101 KREVVQLITPGTVMDGKGIHESENNFIASVSACSNRYGLALSDLTTGENL    150
                     ||||||||||||||:|||:.|:||||||||:...|.||||||||:||||:
BPUM_1608___m     98 KREVVQLITPGTVMEGKGLSENENNFIASVTKFENGYGLALSDLSTGENM    147

BSNT_02754___    151 AVLIERLEDVISEIYSVGAREIVVSGGLDADTVAQLRERCGATISIEDGE    200
                     |..|:||::|:||||||||:|||||..||.:||..|:|||.||||.||.:
BPUM_1608___m    148 AAFIDRLDEVVSEIYSVGAKEIVVSKHLDEETVKTLKERCQATISYEDSD    197

BSNT_02754___    201 --TDEHVTIIEHLNNEDITKTFLRLYTYLKRTQKRSLDHLQPVQVYELEE    248
                       .||...::..| :|.:..|||.||.||:|||||||||||.|||:|||:
BPUM_1608___m    198 ELIDEAERLVSRL-SEQLRSTFLTLYAYLRRTQKRSLDHLQQVQVFELEQ    246

BSNT_02754___    249 AMKIDLYSKRNLELTETIRSKNKKGSLLWLLDETKTAMGGRLLKQWIDRP    298
                     .||||||||||||||||||||:||||||||||||||||||||||||||||
BPUM_1608___m    247 TMKIDLYSKRNLELTETIRSKSKKGSLLWLLDETKTAMGGRLLKQWIDRP    296

BSNT_02754___    299 LIRVNQIEERQEMVETLMSHFFEREDLRERLKEVYDLERLAGRVAFGNVN    348
                     |||::.|:||||||:.||.|||||||||||||:|||||||||||||||||
BPUM_1608___m    297 LIRLSHIKERQEMVQILMDHFFEREDLRERLKQVYDLERLAGRVAFGNVN    346

BSNT_02754___    349 ARDLIQLKESLKQVPGIKQLVASLAHDKAKERAKRIDPCGDVLELLEEAL    398
                     |||||||||||||||.||:||.||..:.||.||..||.|.|:|.|||:||
BPUM_1608___m    347 ARDLIQLKESLKQVPAIKELVHSLPEEMAKSRANDIDLCDDLLNLLEDAL    396

BSNT_02754___    399 YENPPLSVKEGNLIKDGYNQKLDEYRDASRNGKDWIARLEQQEREYTGIR    448
                     |||||:::|||||||||||.||||||||||||||||||||||||||||||
BPUM_1608___m    397 YENPPMTLKEGNLIKDGYNAKLDEYRDASRNGKDWIARLEQQEREYTGIR    446

BSNT_02754___    449 SLKVGFNKVFGYYIEVTKANLHLLEEGRYERKQTLTNAERYITPELKEKE    498
                     |||||||||||||||||:||.||||||||||||||.||||||||||||||
BPUM_1608___m    447 SLKVGFNKVFGYYIEVTRANTHLLEEGRYERKQTLANAERYITPELKEKE    496

BSNT_02754___    499 ALILEAENNICELEYELFTELREKVKQYIPRLQQLAKQMSELDALQCFAT    548
                     |||||||:||.|||||||..|||:||.||||||.||||||||||||||||
BPUM_1608___m    497 ALILEAESNISELEYELFAALREQVKVYIPRLQLLAKQMSELDALQCFAT    546

BSNT_02754___    549 ISENRHYTKPEFSKDEVEVIEGRHPVVEKVMDSQEYVPNNCMMGDNRQML    598
                     :||.|.|.:||||:|||:||:|||||||||||.||||||:|.||:.||.|
BPUM_1608___m    547 VSEKRRYIRPEFSEDEVDVIDGRHPVVEKVMDHQEYVPNDCHMGNGRQTL    596

BSNT_02754___    599 LITGPNMSGKSTYMRQIALISIMAQIGCFVPAKKAVLPIFDQIFTRIGAA    648
                     ||||||||||||||||:|||||:|||||||||.||.||||||||||||||
BPUM_1608___m    597 LITGPNMSGKSTYMRQMALISILAQIGCFVPASKATLPIFDQIFTRIGAA    646

BSNT_02754___    649 DDLISGQSTFMVEMLEAKNAIVNATKNSLILFDEIGRGTSTYDGMALAQA    698
                     ||||||||||||||||||||:|:|||||||||||||||||||||||||||
BPUM_1608___m    647 DDLISGQSTFMVEMLEAKNAMVHATKNSLILFDEIGRGTSTYDGMALAQA    696

BSNT_02754___    699 IIEYVHDHIGAKTLFSTHYHELTVLEDKLPQLKNVHVRAEEYNGTVVFLH    748
                     |||:||||:|||||||||||||||||.:|.:||||||||||:.|||||||
BPUM_1608___m    697 IIEFVHDHVGAKTLFSTHYHELTVLESQLSELKNVHVRAEEHEGTVVFLH    746

BSNT_02754___    749 QIKEGAADKSYGIHVAQLAELPGDLIARAQDILKELEHSGNKPEVP----    794
                     ||||||||||||||||||||||..:|.|||.||.||| ||:....|    
BPUM_1608___m    747 QIKEGAADKSYGIHVAQLAELPDAIIDRAQTILTELE-SGSHEVTPHVSA    795

BSNT_02754___    795 VQKPQVKEEPAQLSFFDEAEKPAETPKLSKKEKQVIDAFKSLNILDMTPL    844
                     ..|.:..||..|||||:..|||...|.|.:|::.||:..||.|::|||||
BPUM_1608___m    796 APKTEKAEEKQQLSFFEVEEKPQTKPVLKQKDQAVIEELKSFNLMDMTPL    845

BSNT_02754___    845 EAMNEMYKLQKKLH    858
                     |||.::|:||||| 
BPUM_1608___m    846 EAMTKLYELQKKL-    858


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02754 and BPUM_1608

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
