Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02751 and BPUM_1606

See DNA alignment / Visit BSNT_02751 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_02751___ymcA.1.24716.seq
#    -bsequence pep-align/BPUM_1606___ymcA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02751___ymcA-BPUM_1606___ymcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02751___ymcA-BPUM_1606___ymcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02751___ymcA
# 2: BPUM_1606___ymcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     121/144 (84.0%)
# Similarity:   135/144 (93.8%)
# Gaps:           1/144 ( 0.7%)
# Score: 605.0
# 
#
#=======================================

BSNT_02751___      1 MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIK     50
                     |||||||:||::||.|||||||||||||||:||||||||.|:|||:||||
BPUM_1606___y      1 MTLYSKKEIVERARELAKMISETEEVDFFKKAEAQINENTKISTIINQIK     50

BSNT_02751___     51 ALQKQAVNLKHYEKHEALKQVEAKIDALQEELEEIPVIQEFRDSQMEVND    100
                     ||||||||||||.|||||||||.|||||||||:||||||||::||:|||.
BPUM_1606___y     51 ALQKQAVNLKHYGKHEALKQVEEKIDALQEELDEIPVIQEFKESQVEVNS    100

BSNT_02751___    101 LLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL-    143
                     ||||||||||||||:|||.|||||||.||||||||:|:.|||: 
BPUM_1606___y    101 LLQLVAHTISNQVTDEIILSTGGDLLLGETGSKVKNSSPSCSIK    144


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.