Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02749 and BPUM_1605
See
DNA alignment /
Visit
BSNT_02749 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence pep-align/BSNT_02749___ymcB.1.24716.seq
# -bsequence pep-align/BPUM_1605___ymcB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02749___ymcB-BPUM_1605___ymcB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02749___ymcB-BPUM_1605___ymcB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02749___ymcB
# 2: BPUM_1605___ymcB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 509
# Identity: 459/509 (90.2%)
# Similarity: 482/509 (94.7%)
# Gaps: 1/509 ( 0.2%)
# Score: 2403.0
#
#
#=======================================
BSNT_02749___ 1 MNEKQKLESGQVNPSDKKSEKDYSKYFEAVYIPPSLKDAKKRGKEAVTYH 50
|||:|:..||||:.||||||||||:||||||||||||||||||||.|.|
BPUM_1605___y 1 MNEEQRKASGQVSSSDKKSEKDYSQYFEAVYIPPSLKDAKKRGKEEVEY- 49
BSNT_02749___ 51 NDFKISEQFKGLGDGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSV 100
|.|:|.|:|:|||:|||||||||||||||||||||||||||||||.|||.
BPUM_1605___y 50 NQFQIDERFQGLGNGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEPTNST 99
BSNT_02749___ 101 DDANVILLNTCAIRENAENKVFGELGHLKALKKNNPDLILGVCGCMSQEE 150
:|||||||||||||||||||||||||||||||:..|||||||||||||||
BPUM_1605___y 100 EDANVILLNTCAIRENAENKVFGELGHLKALKREKPDLILGVCGCMSQEE 149
BSNT_02749___ 151 SVVNRILKKHPFVDMIFGTHNIHRLPELLSEAYLSKEMVVEVWSKEGDVI 200
||||||||||||||:||||||||||||||||.|||||||:||||||||||
BPUM_1605___y 150 SVVNRILKKHPFVDLIFGTHNIHRLPELLSECYLSKEMVIEVWSKEGDVI 199
BSNT_02749___ 201 ENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEVR 250
||||:.|.||||||||||||||||||||||||||||||||||::||||||
BPUM_1605___y 200 ENLPRARQGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPDEIIQEVR 249
BSNT_02749___ 251 RLASEGYKEITLLGQNVNAYGKDFEDMTYGLGDLMDELRKIDIPRIRFTT 300
|||:|||||||||||||||||||||||.||||.|||||||||||||||||
BPUM_1605___y 250 RLAAEGYKEITLLGQNVNAYGKDFEDMEYGLGHLMDELRKIDIPRIRFTT 299
BSNT_02749___ 301 SHPRDFDDRLIEVLAKGGNLLDHIHLPVQSGSSEVLKLMARKYDRERYME 350
||||||||.||||||||||||||||||||||||.||||||||||||||::
BPUM_1605___y 300 SHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSSSVLKLMARKYDRERYLD 349
BSNT_02749___ 351 LVRKIKTAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIY 400
||||||.||||||||||||||||||||||||||||||||||||:||||||
BPUM_1605___y 350 LVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFDAAYTFIY 399
BSNT_02749___ 401 SPREGTPAAKMKDNVPMRVKKERLQRLNALVNEISAKKMKEYEGKVVEVL 450
|||||||||||:|||||.||||||||||||||||||||||||||:.||||
BPUM_1605___y 400 SPREGTPAAKMQDNVPMHVKKERLQRLNALVNEISAKKMKEYEGQTVEVL 449
BSNT_02749___ 451 VEGESKNNPDILAGYTEKSKLVNFKGPKEAIGKIVRVKIQQAKTWSLDGE 500
|||||||||:||||||.||||||||.||||||.||:|||.||||||||||
BPUM_1605___y 450 VEGESKNNPEILAGYTSKSKLVNFKAPKEAIGNIVKVKITQAKTWSLDGE 499
BSNT_02749___ 501 MVGEAIEVK 509
||||||||.
BPUM_1605___y 500 MVGEAIEVN 508
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.