Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02744 and BPUM_1600

See DNA alignment / Visit BSNT_02744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_02744___ymdB.1.24716.seq
#    -bsequence pep-align/BPUM_1600___ymdB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02744___ymdB-BPUM_1600___ymdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02744___ymdB-BPUM_1600___ymdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02744___ymdB
# 2: BPUM_1600___ymdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     215/264 (81.4%)
# Similarity:   248/264 (93.9%)
# Gaps:           0/264 ( 0.0%)
# Score: 1204.0
# 
#
#=======================================

BSNT_02744___      1 MRILFIGDVVGSPGRDMVKEYVPKLKTKYKPHFTIINGENAAHGKGLTEK     50
                     |:|||:||:|||||||.:|||:||||.||:|||||:||||||||||:|||
BPUM_1600___y      1 MKILFVGDIVGSPGRDTLKEYLPKLKKKYQPHFTIVNGENAAHGKGITEK     50

BSNT_02744___     51 IYHRLIQSGADAITMGNHTWDKKEIFDFIDDVPNLVRPANFPEGTPGKGI    100
                     |||.|:|:|||.:|||||||||::|||||||..::||||||||||||||:
BPUM_1600___y     51 IYHELLQAGADVLTMGNHTWDKRDIFDFIDDAAHMVRPANFPEGTPGKGL    100

BSNT_02744___    101 TYVKANGKELAVINLQGRTFLPPLDDPFLKADELIAEAAKRTPYIFIDFH    150
                     |::|..|||||||||||||||||||.||.|.|||||||:||||:||||||
BPUM_1600___y    101 TFIKKQGKELAVINLQGRTFLPPLDCPFQKVDELIAEASKRTPFIFIDFH    150

BSNT_02744___    151 AEATSEKLALGWYTDGRASAVVGTHTHVQTADNRILPKGTAYITDVGMTG    200
                     .||||||||:|||||||||.||||||||||||||:||||||||:||||||
BPUM_1600___y    151 GEATSEKLAMGWYTDGRASCVVGTHTHVQTADNRVLPKGTAYISDVGMTG    200

BSNT_02744___    201 PYDGILGMDRETIIKRFKTNLPVRFTVAEGKTTLSGVVIDIDDQTKKAVK    250
                     |||||||:|||||||||||:|||||.:|||.||||.|:::||:|:|||||
BPUM_1600___y    201 PYDGILGVDRETIIKRFKTSLPVRFEIAEGPTTLSAVIVEIDEQSKKAVK    250

BSNT_02744___    251 IERILINDDHMFFE    264
                     |:||||||||:|||
BPUM_1600___y    251 IDRILINDDHIFFE    264


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