Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02740 and BPUM_1598
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence pep-align/BSNT_02740___recA.1.24716.seq
# -bsequence pep-align/BPUM_1598___recA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02740___recA-BPUM_1598___recA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02740___recA-BPUM_1598___recA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02740___recA
# 2: BPUM_1598___recA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity: 329/348 (94.5%)
# Similarity: 339/348 (97.4%)
# Gaps: 2/348 ( 0.6%)
# Score: 1652.0
#
#
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BSNT_02740___ 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALG 50
|||||||||||||||||||||||||||||:||||||||||||||||||||
BPUM_1598___r 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQTDTRISTVPSGSLALDTALG 50
BSNT_02740___ 51 IGGYPRGRIIEVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPV 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1598___r 51 IGGYPRGRIIEVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPV 100
BSNT_02740___ 101 YAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPK 150
|||||||||:||||||||||||||||||||||||||||||:|||||||||
BPUM_1598___r 101 YAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIVVIDSVAALVPK 150
BSNT_02740___ 151 AEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVM 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1598___r 151 AEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVM 200
BSNT_02740___ 201 FGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKTKIKVVKNKVA 250
||||||||||||||||||||||||||||||||||:|||||:|||||||||
BPUM_1598___r 201 FGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDIMGNKTRIKVVKNKVA 250
BSNT_02740___ 251 PPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGR 300
||||.|||||||||||||||||||||:|||||||||:||||:||||||||
BPUM_1598___r 251 PPFRIAEVDIMYGEGISKEGEIIDLGSELDIVQKSGAWYSYQEERLGQGR 300
BSNT_02740___ 301 ENAKQFLKENKDIMLMIQEQIREHYGLDNNGVVQQQAEETQEELEFEE 348
|||||||||||||:||||||||||||||.|||...:.||.||||||
BPUM_1598___r 301 ENAKQFLKENKDILLMIQEQIREHYGLDTNGVKAPEDEEGQEELEF-- 346
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