Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02739 and BPUM_1597

See DNA alignment / Visit BSNT_02739 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_02739___cinA.1.24716.seq
#    -bsequence pep-align/BPUM_1597___cinA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02739___cinA-BPUM_1597___cinA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02739___cinA-BPUM_1597___cinA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02739___cinA
# 2: BPUM_1597___cinA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity:     307/416 (73.8%)
# Similarity:   353/416 (84.9%)
# Gaps:           0/416 ( 0.0%)
# Score: 1586.0
# 
#
#=======================================

BSNT_02739___      1 MEFPKKAEIIAVGSELLLGQIANTNAQFISKQLAEIGVNVFYHTAVGDNP     50
                     |:..:||||||||||||||||.||||||||||||||||||:|||||||||
BPUM_1597___c      1 MKSERKAEIIAVGSELLLGQITNTNAQFISKQLAEIGVNVYYHTAVGDNP     50

BSNT_02739___     51 ERLKQVIRIAEERSDFIIFSGGLGPTKDDLTKETIANTLGRPLVLNDEAF    100
                     ||||:.|::|:|||:|||||||||||||||||||||:|||:.||||:|||
BPUM_1597___c     51 ERLKRAIQVAQERSNFIIFSGGLGPTKDDLTKETIASTLGKELVLNEEAF    100

BSNT_02739___    101 QSIEDYFKRTKRTMSPNNRKQALVIEGSDVLANHFGMAPGMLTEHESRYY    150
                     :||::||::|.|.|||||||||||:||||||.|.|||||||..:....:|
BPUM_1597___c    101 ESIQEYFRKTGRDMSPNNRKQALVLEGSDVLVNRFGMAPGMFIQENDTFY    150

BSNT_02739___    151 MLLPGPPSELRPMFENEAKPLLLKKMGSNEKIVSTVLRFFGIGESQLEAD    200
                     ||||||||||.||||||||||:.:|:|..|||||.|||||||||||||.|
BPUM_1597___c    151 MLLPGPPSELHPMFENEAKPLISEKLGLKEKIVSVVLRFFGIGESQLETD    200

BSNT_02739___    201 LEDIIDAQTNPTIAPLAADGEVTLRLTAKHADEKETERLLKETEAVILER    250
                     |||:|||||||||||||:||||||||||||.||||||||||||||.||.|
BPUM_1597___c    201 LEDLIDAQTNPTIAPLASDGEVTLRLTAKHEDEKETERLLKETEAKILAR    250

BSNT_02739___    251 VGEFFYGYDDTSLVKELSIACKEKGITISAAESFTGGLFSEWLTDHSGAS    300
                     |||:||||.:||||:|.|.|.::.|.|::||||.|||:|||||||..|||
BPUM_1597___c    251 VGEYFYGYGETSLVREASKALRDHGKTVAAAESLTGGMFSEWLTDLEGAS    300

BSNT_02739___    301 KLFAGGVVCYTNDVKQNVLGVKKETLDRFGAVSKECASELAKGVQKLTGS    350
                     .:.:|.:|||||.|||.|||.::|||...||||||||.|||:||:|||||
BPUM_1597___c    301 SILSGSIVCYTNQVKQQVLGCREETLSSHGAVSKECALELAEGVRKLTGS    350

BSNT_02739___    351 DIGISFTGVAGPDAQEGHEPGHVFIGISANGKEEVHEFHFAGSRTGIRKR    400
                     |||||||||||||..||...|.||||:|.....:|.|:.|.|||:|||||
BPUM_1597___c    351 DIGISFTGVAGPDTHEGQPVGKVFIGLSTKDHTDVFEWMFTGSRSGIRKR    400

BSNT_02739___    401 GAKYGCHLILKLLEQK    416
                     ..|||.|.:|.||::.
BPUM_1597___c    401 AVKYGLHHLLNLLKES    416


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.