Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02738 and BPUM_1596
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence pep-align/BSNT_02738___pgsA.1.24716.seq
# -bsequence pep-align/BPUM_1596___pgsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02738___pgsA-BPUM_1596___pgsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02738___pgsA-BPUM_1596___pgsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02738___pgsA
# 2: BPUM_1596___pgsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 168/193 (87.0%)
# Similarity: 178/193 (92.2%)
# Gaps: 0/193 ( 0.0%)
# Score: 873.0
#
#
#=======================================
BSNT_02738___ 1 MFNLPNKITLARIALIPIFMIIMLAPFDWGRLEVGDESIPVAHLAGAILF 50
||||||||||:||||||:||||||||.|||....|..||.|.||.|||||
BPUM_1596___p 1 MFNLPNKITLSRIALIPVFMIIMLAPLDWGVARFGHVSIEVTHLVGAILF 50
BSNT_02738___ 51 IIASTTDWVDGYYARKLNLVTNFGKFLDPLADKLLVSAALIILVQFDLTP 100
|:||||||:||||||||||||||||||||||||||||||||||||::|||
BPUM_1596___p 51 IVASTTDWIDGYYARKLNLVTNFGKFLDPLADKLLVSAALIILVQYNLTP 100
BSNT_02738___ 101 AWMVIVIISREFAVTGLRLVLAGTGEVVAANMLGKIKTWAQIIAVSALLL 150
|||.|||||||||||||||||||.|||||||||||:||||||||:|||||
BPUM_1596___p 101 AWMAIVIISREFAVTGLRLVLAGGGEVVAANMLGKVKTWAQIIAISALLL 150
BSNT_02738___ 151 HNLPFELVSFPFADLALWVAVFFTVVSGWEYFSKNWEALKTSN 193
||||||||||||.|||:||||||||||||:||.|||||||.||
BPUM_1596___p 151 HNLPFELVSFPFGDLAMWVAVFFTVVSGWDYFVKNWEALKNSN 193
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