Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02737 and BPUM_1595

See DNA alignment / Visit BSNT_02737 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_02737.1.24716.seq
#    -bsequence pep-align/BPUM_1595___ymfM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02737-BPUM_1595___ymfM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02737-BPUM_1595___ymfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02737
# 2: BPUM_1595___ymfM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     172/309 (55.7%)
# Similarity:   230/309 (74.4%)
# Gaps:           8/309 ( 2.6%)
# Score: 887.5
# 
#
#=======================================

BSNT_02737         1 ---MTELGIRLKEAREEKAMSLDDLQAATKIQKRYLTALEEGNYDIIPGK     47
                        :||||.||.||||||.|||:|||..||||||||.|:|:|||||||||
BPUM_1595___y      1 MFVLTELGKRLIEAREEKGMSLEDLQTVTKIQKRYLLAIEQGNYDIIPGK     50

BSNT_02737        48 FYVRAFIKQYAEAVGLDADQLFEEHKKDIPNTYHDDVSEKISGMNLQKEM     97
                     ||||||||||||||||:.:|||||.:||:|:||:|:||:|:|.:..|:|:
BPUM_1595___y     51 FYVRAFIKQYAEAVGLNPEQLFEEFRKDVPSTYNDEVSDKLSNIKPQREL    100

BSNT_02737        98 PKPASKALELLPTILVILGVIVVIAIVYAIIQFANHKNSDDHNAASEKAI    147
                     ||||||.||||||||:|.||:|||||:|.|:|..||.:...:|   :.|.
BPUM_1595___y    101 PKPASKVLELLPTILIIGGVLVVIAIIYVIVQAVNHDSGQKNN---QTAP    147

BSNT_02737       148 TQSESKYEIPKDSTLKENQNNSSEKETDTKKETKENEDKKKEN--DSDKL    195
                     .|||||||:.:||:|.::|....:..:|.::::.:.:|..|::  |.:.:
BPUM_1595___y    148 QQSESKYEVSEDSSLAKDQKKKEKASSDDQEKSSKKDDSSKDSSKDDETI    197

BSNT_02737       196 EIKVAGTEGSLTTYEVSGADKIELELKASDSSWIRVRDENSSSLKEGTLK    245
                     .:|.|.||||.||||.||.:::||.:.|:.:||:|||||:...||.|.||
BPUM_1595___y    198 SLKAANTEGSTTTYEASGTEEMELTISATKASWLRVRDESGKVLKMGELK    247

BSNT_02737       246 KDETYKKDITDQKQVDIRTGYAPNLKIKINGKVLSYELDPKKVMAQTIKI    295
                     ..|::|.|:::..|||||.|.|..:.||:|.:.|.||||||..|.|.|.|
BPUM_1595___y    248 DGESFKTDLSELSQVDIRLGNATGIDIKVNDETLKYELDPKNTMTQNIVI    297

BSNT_02737       296 VNKKEEKSS    304
                     |||.:||||
BPUM_1595___y    298 VNKGKEKSS    306


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