Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02737 and BPUM_1595
See
Amino acid alignment /
Visit
BSNT_02737 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_02737.1.24716.seq
# -bsequence dna-align/BPUM_1595___ymfM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02737-BPUM_1595___ymfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02737-BPUM_1595___ymfM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02737
# 2: BPUM_1595___ymfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1028
# Identity: 602/1028 (58.6%)
# Similarity: 602/1028 (58.6%)
# Gaps: 220/1028 (21.4%)
# Score: 1643.5
#
#
#=======================================
BSNT_02737 1 ---------GTGACTGAACTAGGAATCCGGCTCAAAGAAGCCAGAGAGGA 41
.||||||||.|.||||..|||||||..||.|||||||||||
BPUM_1595___y 1 GTGTTTGTTTTGACTGAATTGGGAAAACGGCTCATTGAGGCCAGAGAGGA 50
BSNT_02737 42 AAAAGCAATGTCATTGGATGATCTCCAAGCGGCAACAAAGATTCAAAAAA 91
|||||..|||||..||||.|||||.||..|||..||.||.||.|||||..
BPUM_1595___y 51 AAAAGGGATGTCGCTGGAGGATCTTCAGACGGTGACCAAAATCCAAAAGC 100
BSNT_02737 92 GGTATTTAACCGCCTTGGAGGAAGGAAACTATGACATTATTCCGGGGAAG 141
|.||.||....||..|.||..|||||||||||||.||||||||.||.||.
BPUM_1595___y 101 GCTACTTGCTAGCAATCGAACAAGGAAACTATGATATTATTCCAGGTAAA 150
BSNT_02737 142 TTTTATGTTCGGGCATTCATCAAGCAATATGCAGAAGCCGTTGGGCTTGA 191
|||||.||..|.||.||.||.||.||||||||.|||||||||||.||..|
BPUM_1595___y 151 TTTTACGTCAGAGCGTTTATTAAACAATATGCCGAAGCCGTTGGACTAAA 200
BSNT_02737 192 TGCGGATCAGCTGTTTGAGGAGCATAAAAAAGATATCCCTAATACGTATC 241
|.|.||.||..||||.||.||...|...||||||.|.||.|..||||||.
BPUM_1595___y 201 TCCTGAACAATTGTTCGAAGAATTTCGTAAAGATGTACCGAGCACGTATA 250
BSNT_02737 242 ATGACGATGTGTCTGAAAAGATCTCCGGCATGAATCTTCAAAAGGAAATG 291
|.||.||.||.|||||.||..|.||....||.||.|..||||..||..||
BPUM_1595___y 251 ACGATGAAGTATCTGATAAATTATCAAATATTAAGCCGCAAAGAGAGCTG 300
BSNT_02737 292 CCGAAGCCAGCATCTAAGGCGCTGGAGCTGCTGCCAACGATACTTG-TTA 340
||.|||||.||.||.||||.|||.|||||||||||.||.|| |||| |||
BPUM_1595___y 301 CCAAAGCCTGCCTCGAAGGTGCTTGAGCTGCTGCCGACCAT-CTTGATTA 349
BSNT_02737 341 TTCTCGGCGTGATTGTCGTGATTGCCATTGTGTACGCGATCATTCAGTTT 390
||...|||||..||||.||.|||||.||..|.||.|..|||.|.|||
BPUM_1595___y 350 TTGGAGGCGTCCTTGTGGTCATTGCGATCATTTATGTCATCGTGCAG--- 396
BSNT_02737 391 GCCAATCACAAAAACAGTGATGATCACAAT-GCGG-CATCAGAAAAAGCA 438
.|||| |.||||..|| |||| ||..||||.||.||
BPUM_1595___y 397 -------------GCAGT--TAATCATGATAGCGGACAGAAGAACAACCA 431
BSNT_02737 439 ATTACG------CA-AAGTGAGA--GCAAGTACGAAATCCCTAAAGATTC 479
.||| || .|||.||| ..|||||.|||.|..||.|.|||||
BPUM_1595___y 432 --GACGGCTCCTCAGCAGTCAGAATCTAAGTATGAAGTATCTGAGGATTC 479
BSNT_02737 480 AACGC-TGAAAGAGAATCAAAATAACAGCTCTGAAAAAGAGACAGACACT 528
|.|.| ||.|| ||.|||||||.| ||||||
BPUM_1595___y 480 ATCTCTTGCAA-AGGATCAAAAGA---------AAAAAG----------- 508
BSNT_02737 529 AAAAAAG-------AAACGA--AAGAAAACGAAGATAA--GAAAAAAGAA 567
|||||| |.|.|| ||||||| ||.| .|||||||
BPUM_1595___y 509 -AAAAAGCTTCGTCAGATGATCAAGAAAA-----ATCATCTAAAAAAG-- 550
BSNT_02737 568 AATGACAGTGAT--AAGCTGGAGAT-----TAAAG--------------- 595
||||| |.|| ||| ||| |||||
BPUM_1595___y 551 -ATGAC--TCATCAAAG-----GATTCATCTAAAGACGATGAAACGATCT 592
BSNT_02737 596 --TTGCTGGC-------ACTGAAGGATCGTTAACG---ACTTATGAAGTG 633
|||..||| ||.|||||.|| |||| ||.|||||||.|
BPUM_1595___y 593 CTTTGAAGGCAGCAAATACAGAAGGCTC---AACGACAACGTATGAAGCG 639
BSNT_02737 634 TCCGGCGCTGATAAAATCGAG----------CTGGAACTGAAG------- 666
||.|||.|.||..|.||.||| |||..||..|||
BPUM_1595___y 640 TCAGGCACAGAAGAGATGGAGTTAACCATTTCTGCTACAAAAGCTTCATG 689
BSNT_02737 667 -----GCATCAGACAGCTCCTGGATTCGAGTGCGCGATGAAAACAGCAGC 711
||.|||||.| |||||..| |||||..||
BPUM_1595___y 690 GCTGCGCGTCAGAGA-----------CGAGTCTG----GAAAAGTGC--- 721
BSNT_02737 712 TCTTTAAAAGAAGGAACGCTGAA--AAAAGA---CGAGACCTATAAAAAA 756
||||| |..|.|||| |||||| |||..|.|.|||||.|
BPUM_1595___y 722 ----TAAAA-----ATGGGTGAACTAAAAGATGGCGAATCGTTTAAAACA 762
BSNT_02737 757 GACATAACTGA------TCAGAAACAAGTTGATATCCGCACCGGATATGC 800
|||.|..|||| |||| ||.||||||||....||..||||
BPUM_1595___y 763 GACTTGTCTGAGCTCTCTCAG------GTCGATATCCGTCTAGGCAATGC 806
BSNT_02737 801 ACCT--AATCTGAAAATAAA----AATCA----ACG-GTAAGGTTCTTTC 839
..|| ||| || |.||.|| |||.| ||| .||||
BPUM_1595___y 807 GACTGGAAT-TG-ATATCAAGGTGAATGACGAGACGCTTAAG-------- 846
BSNT_02737 840 ATATGAACTTGATCCGAAAAAAGTGATGGCACAAACTATAAAGATTGTAA 889
||.|||.|.||.||.||.||....|||.||||||..||...||||||.|
BPUM_1595___y 847 -TACGAATTAGACCCTAAGAACACCATGACACAAAACATTGTGATTGTGA 895
BSNT_02737 890 ATAAAAAGGAA--GAAAAGTCATCTTAA 915
|| ||||||| |||||||||||||||
BPUM_1595___y 896 AT--AAAGGAAAGGAAAAGTCATCTTAA 921
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.