Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00975 and BPUM_1591

See DNA alignment / Visit BSNT_00975 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:38
# Commandline: needle
#    -asequence pep-align/BSNT_00975___ydgH.1.24716.seq
#    -bsequence pep-align/BPUM_1591___ydgH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00975___ydgH-BPUM_1591___ydgH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00975___ydgH-BPUM_1591___ydgH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00975___ydgH
# 2: BPUM_1591___ydgH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1046
# Identity:     401/1046 (38.3%)
# Similarity:   598/1046 (57.2%)
# Gaps:         168/1046 (16.1%)
# Score: 1870.0
# 
#
#=======================================

BSNT_00975___      1 MRAIIKFKWAIAAIVLALTVVLSLFSPNLTELANQKGQAQLPADAVSERA     50
                     ||||||.:|.|..:.:.|..||.:.:||:.:|..:|||..:|....|..|
BPUM_1591___y      1 MRAIIKGRWLITILWIVLAAVLLITAPNMAQLTKEKGQISVPDGYKSSYA     50

BSNT_00975___     51 NAIL---KQAGEDNNSISVVFTLDNAIKKETENQLRIMIDKIKKIDG--V     95
                     |.:|   .:.|:...||.:||...| |.||.|..|:..::.::|...  |
BPUM_1591___y     51 NQLLNKMSENGDTEKSIVIVFQEKN-IVKERETSLKKAMEILEKDQDLHV     99

BSNT_00975___     96 EEVTSPLSAEKEVKDQLMSKDKKTVLMPVTITGSDKKA----EKIADEIY    141
                     |::||...|.|::|.|::|||:.|:|:|||...:..||    ||:.:::.
BPUM_1591___y    100 EDITSYFDANKDIKKQMLSKDRTTLLVPVTYDSNKIKASVFKEKVNEKLK    149

BSNT_00975___    142 QIVPDDLTAYITGASLINQDFAHSSEEGLKKTEVITVCLIIGLLLIVFRS    191
                     .:   :||..:||..||:.|...||:|||||||.||:..|:.:|::||||
BPUM_1591___y    150 SL---NLTYEMTGQPLIDDDVITSSQEGLKKTEFITIGFILIVLVLVFRS    196

BSNT_00975___    192 VVTPFIPIVVVGFSYLISQSILGILVYNVDFPISTFTQTFLVAILFGIGT    241
                     .|.||:|:|.|..|||:||||:..||..:|||:|||||.|:|||:|||||
BPUM_1591___y    197 AVAPFVPLVAVALSYLVSQSIVAYLVKYLDFPLSTFTQIFMVAIMFGIGT    246

BSNT_00975___    242 DYCILLLTRFREELANGHDKKEAALIAYRTGGKTLFISGFAVLIGFSALG    291
                     |||||||:||:||:|:|.||.||.||.|:|.|||:..||.||||||:.:|
BPUM_1591___y    247 DYCILLLSRFKEEIAHGKDKIEAILITYKTAGKTVLFSGIAVLIGFTCIG    296

BSNT_00975___    292 FAKFAIFQSAVGVAVGVGILMIILYTLLPLFMVTLGEKLFWPSKKVLSHS    341
                     .|:|.:::|||.|||||.:|::.|.|::|.||..||:.||||.|..::|.
BPUM_1591___y    297 LAQFQLYKSAVAVAVGVAVLIVALLTIVPFFMAVLGKVLFWPIKGDIAHP    346

BSNT_00975___    342 DNKLWAFLGRHSVARPFLFIVITVVITLPFILTYDDQISFDSTAEISNDY    391
                     .:|:|...||.|..:|...::|..:||||.||.|...:|::|..||.|.|
BPUM_1591___y    347 QSKMWETAGRFSFKKPLFSLLIVGIITLPPILMYKGTLSYNSLDEIGNKY    396

BSNT_00975___    392 KSIKALEAIKDGFGEGKAFPINVVVKGDKDLTTADTIPYLGNISKAIEKV    441
                     :|:.|...|.|.||.|:|.|..:|||....|.....:..:..:|:|||:.
BPUM_1591___y    397 ESVNAFNTISDKFGPGEALPATIVVKSADLLDNNKGLIAVEKLSRAIEQT    446

BSNT_00975___    442 DHVDSVMTITQPTGEKIKDLYIDNQLGSVSDGLNKTVKGIADVQSGLT--    489
                     |.|..|.:.|:|.|:.:.|||:.:|...::.||:|:.:|:..:|..||  
BPUM_1591___y    447 DGVSKVRSATRPVGKGLSDLYVKSQAKELNTGLDKSNEGLKKIQDALTTM    496

BSNT_00975___    490 --DIEN----------GLNQMAGQTGSASNG-----------GSG-----    511
                       .||:          |:|::...|.|...|           .||     
BPUM_1591___y    497 SQSIEDQTPQIKSSGKGINKLISGTESVKTGIQNIEKSLRELQSGIDQNK    546

BSNT_00975___    512 -----------GSLGDAADGLGKINQQLQL---VSKQIS------QTGNT    541
                                |:..:....:.::|||:.|   :||::.      .|.::
BPUM_1591___y    547 NGVAQIKEKIKGAKKELTAQVAQVNQQVSLYKSISKELKAALAKVDTSSS    596

BSNT_00975___    542 A---------QTVQQLTAISGQLGQ-------------------------    557
                     |         |..||.:.:..|:.|                         
BPUM_1591___y    597 AAADVKALITQANQQFSTLEKQIPQVKENQSYQAIKASYNELSTTLQEGA    646

BSNT_00975___    558 -----------------------------------------------IQT    560
                                                                    |:|
BPUM_1591___y    647 KQADSYAKQAKEARKQLEAADAFIAKAKEQQKVLTSQIDELIAGLDAIET    696

BSNT_00975___    561 GLEQ------------------ANQQLSGQ---QAQAGTLTESLKKLSEG    589
                     ||::                  |.|.:.||   :.:.|...::|.||::|
BPUM_1591___y    697 GLDKTSKGQGQIVDNMPKLANGAGQVIDGQKQMKEKIGGFGDNLTKLTDG    746

BSNT_00975___    590 VRSANQGLTKVSDGITASSDMLEDMSKSPTVRDTGIFIPGQVMKDKDFKK    639
                     :..:..||.|:|.|:..:.|.|:::..:|.....|.|||..|:|:|.||:
BPUM_1591___y    747 LNKSVDGLEKISSGLMGAGDYLDELKNAPDQDMAGWFIPKDVLKNKAFKQ    796

BSNT_00975___    640 SIDQYSFADGKGVQLSVVLDSNPYSEQAIATINQIKKAVANEVDGTPLED    689
                     ..|.|...|.|..::.|:|:.|||..:|::||.|::.:|...:..|.|:|
BPUM_1591___y    797 VFDSYMSDDRKMTKIDVILEKNPYGNEALSTIKQVEASVERALPETNLKD    846

BSNT_00975___    690 AQIVYGGVTSMNADLKELSTTDFSRTMVIMIIGLFIVLTILFRSMIMPIY    739
                     |.....||:|||||||:||..||::|::.|:||:|::|.|||||::||:|
BPUM_1591___y    847 ASFGVSGVSSMNADLKQLSDQDFNKTVLYMMIGIFLILVILFRSLVMPLY    896

BSNT_00975___    740 MIASLLLTYYTSISITELIFVNGLGNAGVSWAVPFFSFVILIALGVDYSI    789
                     ::.||:|||:|:|.:||.||.:..|..|::||||||.||||:||||||||
BPUM_1591___y    897 LVGSLILTYFTAIGMTEFIFTHFFGYPGINWAVPFFGFVILMALGVDYSI    946

BSNT_00975___    790 FLLDRFKEEVHLGIEQGVVRSMSKMGSVIITAAIILAGTFAAMMPSGVNT    839
                     ||::||.|.....|:..:..||..|||||::||:|||||||||:||||.:
BPUM_1591___y    947 FLMERFNEYKTKDIQFAMTESMKNMGSVIMSAAVILAGTFAAMLPSGVLS    996

BSNT_00975___    840 LMQVASVIIIGLLLYGLVILPLFIPAIIATFGEGNWWPFGRKKGKE    885
                     |:|:|::::.|||||.||:||||:|.::..||..||:||.||:   
BPUM_1591___y    997 LLQIATLVLTGLLLYALVVLPLFVPVMVKLFGSANWFPFKRKE---   1039


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00975 and BPUM_1591

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
