Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02728 and BPUM_1586

See DNA alignment / Visit BSNT_02728 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence pep-align/BSNT_02728___ymfC.1.24716.seq
#    -bsequence pep-align/BPUM_1586___ymfC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02728___ymfC-BPUM_1586___ymfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02728___ymfC-BPUM_1586___ymfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02728___ymfC
# 2: BPUM_1586___ymfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     181/241 (75.1%)
# Similarity:   208/241 (86.3%)
# Gaps:           0/241 ( 0.0%)
# Score: 951.0
# 
#
#=======================================

BSNT_02728___      1 MSTKADNRHLYLKVIERIKEDIKNGIYTEKEKLPSEFELSKKLGVSRATL     50
                     ||||.||||||||||:||||||::|:|.|||||||||||||.||||||||
BPUM_1586___y      1 MSTKTDNRHLYLKVIDRIKEDIQSGVYAEKEKLPSEFELSKLLGVSRATL     50

BSNT_02728___     51 REALRILEEEHVIIRRHGVGTFVHSKPLFLSGIEQLNSVTKMIEQANMTP    100
                     ||||||||||..:||||||||||:::|||.:|||||.||||||||.||||
BPUM_1586___y     51 REALRILEEEKYLIRRHGVGTFVNTRPLFSTGIEQLASVTKMIEQVNMTP    100

BSNT_02728___    101 GTIFLSSQVLMPSEDDTKRFHLAEGQELFYLERVRTADGQPIVYCIDKIP    150
                     ||||||||..:|:|:|..||...|..|:|.:||||||||||:|||:||||
BPUM_1586___y    101 GTIFLSSQEGVPTENDVIRFQCDESDEIFSMERVRTADGQPVVYCLDKIP    150

BSNT_02728___    151 MNILPNSFSHQQESMFDLLEKNSGSVISYAVTDIEPIGYHDTISPVLECD    200
                     :..||.||:|::||:|:|..:...|.|.|||.|||||||||.:||:||||
BPUM_1586___y    151 VKHLPASFTHEEESLFELFGREPHSGIKYAVADIEPIGYHDQVSPILECD    200

BSNT_02728___    201 PETALLLLKQTHYDQHDKPVLYSLNYFRADKFRFHVLRKRF    241
                     ||||||||||.||||.|:||||||||||||||.|||:||||
BPUM_1586___y    201 PETALLLLKQMHYDQDDQPVLYSLNYFRADKFSFHVIRKRF    241


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