Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02728 and BPUM_1586

See Amino acid alignment / Visit BSNT_02728 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_02728___ymfC.1.24716.seq
#    -bsequence dna-align/BPUM_1586___ymfC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02728___ymfC-BPUM_1586___ymfC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02728___ymfC-BPUM_1586___ymfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02728___ymfC
# 2: BPUM_1586___ymfC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 750
# Identity:     528/750 (70.4%)
# Similarity:   528/750 (70.4%)
# Gaps:          48/750 ( 6.4%)
# Score: 1749.0
# 
#
#=======================================

BSNT_02728___      1 ATGTCTACAAAAGCTGATAATCGGCACTTGTATTTGAAAGTAATTGAACG     50
                     |||||.||.|||.|.||.|||||.||.||.|||||||||||.|||||.||
BPUM_1586___y      1 ATGTCGACCAAAACAGACAATCGCCATTTATATTTGAAAGTGATTGACCG     50

BSNT_02728___     51 AATTAAAGAGGATATAAAAAATGGGATCTACACTGAGAAGGAAAAGCTGC    100
                     .||||||||.||||||.||...||..|.|||.|.||.||.|||||.||||
BPUM_1586___y     51 TATTAAAGAAGATATACAATCAGGCGTATACGCCGAAAAAGAAAAACTGC    100

BSNT_02728___    101 CTTCTGAATTTGAGCTTTCCAAAAAGCTT---GGTGTCAGCAGAGCGACG    147
                     ||||||||||||||||.||   |||||||   ||.||.||.||||||||.
BPUM_1586___y    101 CTTCTGAATTTGAGCTCTC---AAAGCTTTTAGGCGTGAGTAGAGCGACA    147

BSNT_02728___    148 CTAAGAGAAGCCTTGCGGATACTGGAAGAAGAG---CATGTGATTATCAG    194
                     ||..|.||||||.|.||.|||.|.|||||||||   .||.|.|||   ||
BPUM_1586___y    148 CTGCGTGAAGCCCTTCGTATATTAGAAGAAGAGAAATATTTAATT---AG    194

BSNT_02728___    195 AAGGCATGGTGTAGGCACTTTTGTCCATTCTAAG-CCGTTATTTCTTT--    241
                     ||||||||||||.||.||.||||||.|..| ||| ||    ..|||||  
BPUM_1586___y    195 AAGGCATGGTGTGGGGACATTTGTCAACAC-AAGACC----ACTCTTTTC    239

BSNT_02728___    242 --CGGGCATTGAACAGCTGAACAGTGTAACCAAGATGATAGAACAGGCGA    289
                       |.|||||.|||||||||...|||||.||.||.||||||||.||||..|
BPUM_1586___y    240 AACAGGCATAGAACAGCTGGCAAGTGTGACAAAAATGATAGAGCAGGTCA    289

BSNT_02728___    290 ATATGACCCCTGGCACGATTTTTCTATCATCACAAGTGCTTA-----TGC    334
                     |||||||.|||||.||.||.|||.||||.||.||||     |     |.|
BPUM_1586___y    290 ATATGACGCCTGGTACCATCTTTTTATCCTCGCAAG-----AAGGGGTAC    334

BSNT_02728___    335 CGTCTGAAGATGATACGAAGAGATTTCATTTGGCAGAAGGGCAAGAACTT    384
                     |..|.||..|||||..||...|.|||||.|..|..|||....|.||..||
BPUM_1586___y    335 CAACAGAGAATGATGTGATTCGTTTTCAGTGTGATGAATCTGATGAGATT    384

BSNT_02728___    385 TTTTACCTTGAACGAGTCAGGACAGCTGACGGACAGCCGATTGTGTATTG    434
                     ||||...|.||.||.||..|.||.||.||.||||||||..|.||.||.||
BPUM_1586___y    385 TTTTCAATGGAGCGCGTTCGAACGGCAGATGGACAGCCCGTGGTTTACTG    434

BSNT_02728___    435 TATAGACAAAATTCCGATGAA-TATTTTGCCGAATTCTTTTTCTCATCAG    483
                     |.||||.|||||||||.|.|| .||.||.||| .|||||||.|.|||.|.
BPUM_1586___y    435 TTTAGATAAAATTCCGGTCAAGCATCTTCCCG-CTTCTTTTACACATGAA    483

BSNT_02728___    484 CAAGAATCTATGTTTGACCTTCTT----GAGAAAAATTCAGGCTCCGTAA    529
                     .||||.||..|.|||||.||..||    |||||..|..|||    ||..|
BPUM_1586___y    484 GAAGAGTCGCTTTTTGAGCTGTTTGGAAGAGAACCACACAG----CGGGA    529

BSNT_02728___    530 TCAGCTATGCAGTAACTGATATAGAACCGATCGGCTATCACGATACCA--    577
                     |.|..||||||||..||||.||.|||||.||||||||.||||||  ||  
BPUM_1586___y    530 TTAAATATGCAGTTGCTGACATTGAACCAATCGGCTACCACGAT--CAGG    577

BSNT_02728___    578 TTTCTCCAGTACTTGAATGCGATCCGGAAACAGCCCTTTTGCTGTTAAAA    627
                     ||||.||..||||.|||||.||.||.||||||||..|.||..|..|||||
BPUM_1586___y    578 TTTCACCGATACTAGAATGTGACCCTGAAACAGCATTATTATTACTAAAA    627

BSNT_02728___    628 CAAACCCATTACGATCAGCACGATAAACCGGTGCTT-TATTCTTTAAATT    676
                     ||||..||.||.||||||.|.|||.|.||||| ||| ||.||..|.||||
BPUM_1586___y    628 CAAATGCACTATGATCAGGATGATCAGCCGGT-CTTATACTCGCTTAATT    676

BSNT_02728___    677 ATTTTAGAGCGGATAAATTCAGATTTCATGTTTTGCGTAAACGATTCTAA    726
                     |||||.||||||||||||||||.||||||||..|.|||||||||||.|||
BPUM_1586___y    677 ATTTTCGAGCGGATAAATTCAGCTTTCATGTGATACGTAAACGATTTTAA    726


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