Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_02722 and BPUM_1582

See DNA alignment / Visit BSNT_02722 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence pep-align/BSNT_02722___ymfA.1.24716.seq
#    -bsequence pep-align/BPUM_1582.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02722___ymfA-BPUM_1582.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02722___ymfA-BPUM_1582.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02722___ymfA
# 2: BPUM_1582
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 555
# Identity:     471/555 (84.9%)
# Similarity:   514/555 (92.6%)
# Gaps:           0/555 ( 0.0%)
# Score: 2401.0
# 
#
#=======================================

BSNT_02722___      1 MKKKNTENVRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGI     50
                     |||||||||||||||||||||||||||||||||:||||||||||||||||
BPUM_1582          1 MKKKNTENVRIIALGGVGEIGKNLYVIEIDSDIYVVDAGLMHPENEMLGI     50

BSNT_02722___     51 DVVIPDISYLIERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLT    100
                     ||||||||||.|||||||||||||||||.|||||:.|:||||||||||||
BPUM_1582         51 DVVIPDISYLTERADRVKAIFLTHGHDEAIGGVFHCLSKLSVPVYGTKLT    100

BSNT_02722___    101 LALLREKLKQYGHNRKTDLREIHSKSVITFESTKVSFFRTIHSIPDSVGV    150
                     ||||||||||||.|:|.||||:|:|||||||:||||||||.||||||||:
BPUM_1582        101 LALLREKLKQYGFNQKADLREVHAKSVITFETTKVSFFRTNHSIPDSVGI    150

BSNT_02722___    151 SFKTSLGSIVCTGDFKFDQTPALNQTCDIGEIAKIGNSGVLALLSDSANA    200
                     |||||||||||||||||||||||||.|||||||||||:||||||||||||
BPUM_1582        151 SFKTSLGSIVCTGDFKFDQTPALNQACDIGEIAKIGNNGVLALLSDSANA    200

BSNT_02722___    201 ERPGYTPSEAAVSGEISDALYNSQNRVIIAVFASNINRIQQVIHAAAQNG    250
                     |:||||||||.|..|||:|:||::||||:||.:|||||:||:|:|..|||
BPUM_1582        201 EKPGYTPSEALVQDEISNAMYNAENRVIVAVSSSNINRVQQIINATNQNG    250

BSNT_02722___    251 RKIAVAGKNLQSVLQLARKLGYIEADDELFISVQDVKKYPKREVAIITAG    300
                     ||:||||||:.:.||||.||||:.||:|||:.||:|||..|.:|.|:|||
BPUM_1582        251 RKLAVAGKNMMTTLQLAIKLGYVTADEELFVPVQEVKKMAKNDVVILTAG    300

BSNT_02722___    301 SQGEPLAALTRMANKAHKQLNIEEGDTVVIASTPIPGQELIYSKTVDLLA    350
                     |.||||||||:||.:.||||:||:.|||||||||:|||||.||||||.|.
BPUM_1582        301 SHGEPLAALTKMAKQNHKQLHIEKDDTVVIASTPLPGQELTYSKTVDFLT    350

BSNT_02722___    351 RAGAQVIFAQKRVHVSGHGSQEELKLMINLLKPKYLIPVNGEYRMQKAHS    400
                     |:|||||||||||||||||.|||||||:||||||||||||||||||||||
BPUM_1582        351 RSGAQVIFAQKRVHVSGHGCQEELKLMLNLLKPKYLIPVNGEYRMQKAHS    400

BSNT_02722___    401 KIAEETGMKRSDIFLIEKGDVVEFRGQNVKIGDKVPYGNILIDGLGVGDI    450
                     :||||.||||||||||:|||||||||||||||:||..|||||||||||||
BPUM_1582        401 RIAEEVGMKRSDIFLIDKGDVVEFRGQNVKIGEKVHQGNILIDGLGVGDI    450

BSNT_02722___    451 GNIVLRDRRLLSQDGILIVVITLDKQKKHLVSGPEIITRGFVYVRESEGL    500
                     ||||||||||||||||||||||||||||.|:|||||||||||||||||.|
BPUM_1582        451 GNIVLRDRRLLSQDGILIVVITLDKQKKQLISGPEIITRGFVYVRESEEL    500

BSNT_02722___    501 IVQATELVRSIVTEATETSNVEWSTLKQAMRDALNQFLYEKTKRKPMIIP    550
                     ||:|||:|:.||.|.||.|.||||||||:|||.|||||||||||||||||
BPUM_1582        501 IVKATEMVKGIVKEQTENSIVEWSTLKQSMRDVLNQFLYEKTKRKPMIIP    550

BSNT_02722___    551 IIMEV    555
                     |||||
BPUM_1582        551 IIMEV    555


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02722 and BPUM_1582

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
