Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02721 and BPUM_1581

See DNA alignment / Visit BSNT_02721 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence pep-align/BSNT_02721___dapA.1.24716.seq
#    -bsequence pep-align/BPUM_1581___dapA2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02721___dapA-BPUM_1581___dapA2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02721___dapA-BPUM_1581___dapA2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02721___dapA
# 2: BPUM_1581___dapA2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     237/290 (81.7%)
# Similarity:   263/290 (90.7%)
# Gaps:           2/290 ( 0.7%)
# Score: 1210.0
# 
#
#=======================================

BSNT_02721___      1 MNFGNVSTAMITPFDNKGNVDFQKLSTLIDYLLKNGTDSLVVAGTTGESP     50
                     |||||::||||||||.|||:||||||.|||||||||:|||||||||||||
BPUM_1581___d      1 MNFGNIATAMITPFDKKGNIDFQKLSILIDYLLKNGSDSLVVAGTTGESP     50

BSNT_02721___     51 TLSTEEKIALFEYTVKEVNGRVPVIAGTGSNNTKDSIKLTKKAEEAGVDA    100
                     |||||||:|||:.:||..|||..:|||||||||..|||||||||||||||
BPUM_1581___d     51 TLSTEEKVALFQQSVKLANGRCKIIAGTGSNNTNASIKLTKKAEEAGVDA    100

BSNT_02721___    101 VMLVTPYYNKPSQEGMYQHFKAIAAETSLPVILYNVPGRTVASLAPETTI    150
                     ||||.||||||||||||.||||||..|||||:||||||||||||||||||
BPUM_1581___d    101 VMLVVPYYNKPSQEGMYAHFKAIAESTSLPVMLYNVPGRTVASLAPETTI    150

BSNT_02721___    151 RLAADIPNVVAIKEASGDLEAITKIIAETPEDFYVYSGDDALTLPILSVG    200
                     :| |.|||:||||||||||:|:|||||||||||.||||||:||||.:|||
BPUM_1581___d    151 KL-AQIPNIVAIKEASGDLDAMTKIIAETPEDFDVYSGDDSLTLPAVSVG    199

BSNT_02721___    201 GRGVVSVASHIAGTDMQQMIKNYTNGQTANAALIHQKLLPIMKELFKAPN    250
                     .:|||||||||.|.|||||:|:|.:||||||||||||||||||:||.|||
BPUM_1581___d    200 AKGVVSVASHIVGLDMQQMLKSYASGQTANAALIHQKLLPIMKQLFSAPN    249

BSNT_02721___    251 PAPVKTALQLRGLDVGSVRLPLVPLTEDERLSLSSTISEL    290
                     |.||||||||:|||||||||||:||:|:|||.|||.::. 
BPUM_1581___d    250 PTPVKTALQLKGLDVGSVRLPLLPLSEEERLDLSSVLNS-    288


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