Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02721 and BPUM_1581

See Amino acid alignment / Visit BSNT_02721 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence dna-align/BSNT_02721___dapA.1.24716.seq
#    -bsequence dna-align/BPUM_1581___dapA2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02721___dapA-BPUM_1581___dapA2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02721___dapA-BPUM_1581___dapA2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02721___dapA
# 2: BPUM_1581___dapA2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 896
# Identity:     631/896 (70.4%)
# Similarity:   631/896 (70.4%)
# Gaps:          52/896 ( 5.8%)
# Score: 2118.5
# 
#
#=======================================

BSNT_02721___      1 ATGAATTTCGGAAATGTGTCTACAGCGATGATTACACCCTTTGACAATAA     50
                     |||||||||||||||.|..|.|||||.|||||||||||.|||||.|| ||
BPUM_1581___d      1 ATGAATTTCGGAAATATCGCAACAGCTATGATTACACCTTTTGATAA-AA     49

BSNT_02721___     51 AGGG-AACGTAGACTTTCAAAAACTGTCTACACTGATTGATTACTTGTTG     99
                     |||| |||.|.||.||.|||||.||.||.|.|||.||||||||||||.|.
BPUM_1581___d     50 AGGGCAACATTGATTTCCAAAAGCTATCAATACTCATTGATTACTTGCTA     99

BSNT_02721___    100 AAAAACGGAACGGATTCTTTAGTAGTAGCGGGAACAACTGGAGAATCTCC    149
                     ||||||||.|..||.||.|||||.||.||.||.|||||.||.|||||.||
BPUM_1581___d    100 AAAAACGGCAGTGACTCGTTAGTCGTTGCAGGGACAACAGGCGAATCGCC    149

BSNT_02721___    150 GACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACAGTAAAAG    199
                     .||..|.||.||||||||||||.|.||.||||||.|..|..|.||||||.
BPUM_1581___d    150 AACTTTATCGACTGAAGAAAAAGTCGCTCTTTTTCAGCAATCGGTAAAAT    199

BSNT_02721___    200 AAGTAAACGGACGGGTGCCCGTT--------ATCGCTGGTACTGGAAGCA    241
                     .||.|||        ||..||||        ||.||.||.||.||.||.|
BPUM_1581___d    200 TAGCAAA--------TGGTCGTTGTAAAATCATTGCAGGAACAGGCAGTA    241

BSNT_02721___    242 ACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGC    291
                     |.|||||.||.|..||.||.||.||.||.||||||||.||.|||||||||
BPUM_1581___d    242 ATAACACAAATGCGTCTATCAAACTAACGAAAAAAGCAGAAGAAGCGGGC    291

BSNT_02721___    292 GTGGACGCTGTTATGCTTGT--TACCCCGTATTACAATAAACCTTCTCAA    339
                     ||.||.||.||.||||||||  ||  ||.||.|||||.||.||.||.||.
BPUM_1581___d    292 GTTGATGCAGTGATGCTTGTCGTA--CCTTACTACAACAAGCCATCACAG    339

BSNT_02721___    340 GAAGGAATGTA-CCAGCATTTTAAAGCAATTGCGGCAGAG---ACATCTC    385
                     |||||.||||| .|| ||.||||||||.|||   ||.|||   |||||||
BPUM_1581___d    340 GAAGGCATGTATGCA-CACTTTAAAGCCATT---GCCGAGTCTACATCTC    385

BSNT_02721___    386 TTCCGGTTATTCTCTATAATGTTCCTGGCCGTACGGTTGCTTCTCTTGCT    435
                     ||||.||.||.||.||.|||||.||.||..|.||||||||.||..|.|||
BPUM_1581___d    386 TTCCTGTCATGCTTTACAATGTACCGGGGAGAACGGTTGCGTCATTAGCT    435

BSNT_02721___    436 CCTGAAACGACGA-TCCGTTTG-GCGGCAGACATTCCGAATGTGGTTGCG    483
                     ||.|||||.||.| |..|.||| ||     |.||.||.||..|.||.||.
BPUM_1581___d    436 CCAGAAACAACTATTAAGCTTGCGC-----AAATACCTAACATTGTCGCA    480

BSNT_02721___    484 ATTAAAGAAGCGAGCGGAGACCTCGAAGCGATTACAAAAATTATTGCTGA    533
                     ||.||||||||.||.||.||.||.||.||.||.||||||||.|||||.||
BPUM_1581___d    481 ATCAAAGAAGCAAGTGGTGATCTTGATGCTATGACAAAAATCATTGCAGA    530

BSNT_02721___    534 AACACCTGAAGACTTCTATGTCTATTCAGGGGATGA-TGCTCTGACGCTT    582
                     .|||||.|||||.|||.||||.||||||||.||.|| .||| |.||.|||
BPUM_1581___d    531 GACACCAGAAGATTTCGATGTTTATTCAGGTGACGACAGCT-TAACACTT    579

BSNT_02721___    583 CCAATTCTTTCAGTTGGAGGAAGAGGAGTTGTGTCAGTGGCGAGCCATAT    632
                     |||..|.|.||.|||||.|.||.||||||.||.||.||.|||...|||||
BPUM_1581___d    580 CCAGCTGTATCTGTTGGTGCAAAAGGAGTGGTCTCTGTAGCGTCTCATAT    629

BSNT_02721___    633 TGCAGGCACTGATATGCAGCAAATGATCAAAAATTATACGAATGGGCAAA    682
                     .|.|||...||||||||||||||||.|.||||..|||.|....||.||||
BPUM_1581___d    630 CGTAGGGCTTGATATGCAGCAAATGCTGAAAAGCTATGCTTCAGGTCAAA    679

BSNT_02721___    683 CAGCTAATGCGGCACTGATTCATCAGAAACTGCTGCCGATTATGAAGGAA    732
                     |.||.|||||.|||.||||.|||||.||.||.||.||.||.|||||..|.
BPUM_1581___d    680 CGGCCAATGCCGCATTGATCCATCAAAAGCTACTCCCAATCATGAAACAG    729

BSNT_02721___    733 CTGTTTAAAGCGCCTAATCCTGCTCCAGTCAAAACAGCGCTTCAGCTGAG    782
                     ||.||...||||||.|||||..|.||.||.||||||||.||||||||.|.
BPUM_1581___d    730 CTATTCTCAGCGCCAAATCCAACGCCTGTTAAAACAGCTCTTCAGCTAAA    779

BSNT_02721___    783 AGGTCTTGATGTCGGTTCTGTGCGTCTGCCTCTAGTCCCGTTAACTGAGG    832
                     |||.||.||||||||.||.||.|||||.||.||..|.||.||..|.||.|
BPUM_1581___d    780 AGGACTAGATGTCGGATCGGTTCGTCTTCCGCTTCTACCTTTGTCAGAAG    829

BSNT_02721___    833 ATGAACGTCTGAGCTTAAGCAGCACG-----ATCAGCGAACTGTAA    873
                     |.||..|.|||...||||||||  ||     |.||||.||      
BPUM_1581___d    830 AAGAGAGACTGGATTTAAGCAG--CGTCTTAAACAGCTAA------    867


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02721 and BPUM_1581

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
