Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02718 and BPUM_1579
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence pep-align/BSNT_02718___asd.1.24716.seq
# -bsequence pep-align/BPUM_1579___asd.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02718___asd-BPUM_1579___asd.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02718___asd-BPUM_1579___asd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02718___asd
# 2: BPUM_1579___asd
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity: 296/346 (85.5%)
# Similarity: 327/346 (94.5%)
# Gaps: 7/346 ( 2.0%)
# Score: 1549.0
#
#
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BSNT_02718___ 1 MGRGLHVAVVGATGAVGQQMLKTLEDRNFEMDTLTLLSSKRSAGTKVTFK 50
||||||||||||||||||||||||.||:|||||||||||||||||||||:
BPUM_1579___a 1 MGRGLHVAVVGATGAVGQQMLKTLADRDFEMDTLTLLSSKRSAGTKVTFR 50
BSNT_02718___ 51 GQELTVQEASPESFEGVNIALFSAGGSVSQALAPEAVKRGAIVIDNTSAF 100
|||.|||||:||||||||||||||||:||:|||||||||||||:||||||
BPUM_1579___a 51 GQEYTVQEATPESFEGVNIALFSAGGNVSKALAPEAVKRGAIVVDNTSAF 100
BSNT_02718___ 101 RMDENTPLVVPEVNEADLHEHNGIIANPNCSTIQMVAALEPIRKAYGLNK 150
|||||.|||||||||.|||:|.|||||||||||||||||||:|:|||:.|
BPUM_1579___a 101 RMDENIPLVVPEVNEKDLHDHKGIIANPNCSTIQMVAALEPLRQAYGMKK 150
BSNT_02718___ 151 VIVSTYQAVSGAGNEAVKELYSQTQAILNKEEIEPEIMPVKGDKKHYQIA 200
|||||||||||||:||:.|||||:|||||||:::||:|| ||||
BPUM_1579___a 151 VIVSTYQAVSGAGHEAIDELYSQSQAILNKEDVKPEVMP-------YQIA 193
BSNT_02718___ 201 FNAIPQIDKFQDNGYTFEEMKMINETKKIMHMPDLQVAATCVRLPIQTGH 250
|||||||||||||||||||||||||||||||||:|:||||||||||:|||
BPUM_1579___a 194 FNAIPQIDKFQDNGYTFEEMKMINETKKIMHMPELEVAATCVRLPIETGH 243
BSNT_02718___ 251 SESVYIEVDRDDATVEDIKNLLKEAPGVTLQDDPSQQLYPMPADAVGKND 300
|||||:|::..||||||:|::||:|||:|||||||||:||||||||||||
BPUM_1579___a 244 SESVYVELESTDATVEDVKSILKDAPGITLQDDPSQQIYPMPADAVGKND 293
BSNT_02718___ 301 VFVGRIRKDLDRANGFHLWVVSDNLLKGAAWNSVQIAESLKKLNLV 346
||||||||||||.||||:|:|||||||||||||||||||||.|.||
BPUM_1579___a 294 VFVGRIRKDLDRPNGFHMWIVSDNLLKGAAWNSVQIAESLKALKLV 339
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