Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02718 and BPUM_1579
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_02718___asd.1.24716.seq
# -bsequence dna-align/BPUM_1579___asd.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02718___asd-BPUM_1579___asd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02718___asd-BPUM_1579___asd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02718___asd
# 2: BPUM_1579___asd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1047
# Identity: 801/1047 (76.5%)
# Similarity: 801/1047 (76.5%)
# Gaps: 33/1047 ( 3.2%)
# Score: 3070.0
#
#
#=======================================
BSNT_02718___ 1 ATGGGAAGAGGTTTACACGTAGCTGTTGTCGGAGCGACAGGGGCTGTGGG 50
|||||||||||.||.||.||||||||.||.||||||||.||.|||||.||
BPUM_1579___a 1 ATGGGAAGAGGATTGCATGTAGCTGTAGTTGGAGCGACTGGAGCTGTCGG 50
BSNT_02718___ 51 ACAACAAATGCTTAAAACACTTGAAGACAGAAACTTTGAAATGGACACAC 100
.|||||||||.|.||||||||.|..||||||.|.|||||||||||.||||
BPUM_1579___a 51 TCAACAAATGTTAAAAACACTAGCTGACAGAGATTTTGAAATGGATACAC 100
BSNT_02718___ 101 TTACATTGCTATCTTCAAAACGCTCTGCGGGGACAAAAGTCACGTTTAAA 150
|.||..|.|||||.||||||||.|||||.||.||||||||.||.||.|.|
BPUM_1579___a 101 TGACTCTACTATCCTCAAAACGTTCTGCTGGAACAAAAGTGACATTCAGA 150
BSNT_02718___ 151 GGCCAAGAACTGACTGTTCAGGAAGCTTCTCCTGAGAGCTTTGAAGGGGT 200
||.|||||....|||||.||||||||..|.|||||.|||||||||||.||
BPUM_1579___a 151 GGTCAAGAGTATACTGTACAGGAAGCAACACCTGAAAGCTTTGAAGGAGT 200
BSNT_02718___ 201 AAATATTGCTTTGTTCAGCGCCGGCGGAAGCGTATCACAA-GCATTGGCA 249
|||.|||||.||.|||||.||.||.||||..||.|| ||| ||..|.||.
BPUM_1579___a 201 AAACATTGCATTATTCAGTGCTGGAGGAAATGTTTC-CAAGGCGCTCGCT 249
BSNT_02718___ 250 CCAGAAGCTGTAAAACGCGGCGCTATTGTTATAGATAATACGAGCGCGTT 299
||.|||||.||.|||||.||.||.||||||.||||.||.||.||.||.||
BPUM_1579___a 250 CCTGAAGCAGTCAAACGAGGTGCGATTGTTGTAGACAACACAAGTGCTTT 299
BSNT_02718___ 300 CCGCATGGATGAAAATACACCGCTTGTTGTGCCAGAAGTGAATGAGGCAG 349
|||.|||||.|||||.|..||.|||||.||.|||||.||.||.||...||
BPUM_1579___a 300 CCGTATGGACGAAAACATCCCTCTTGTCGTACCAGAGGTAAACGAAAAAG 349
BSNT_02718___ 350 ACTTGCATGAACACAACGGCATTATTGCCAATCCAAACTGCTCTACAATC 399
||||||||||.||.||.||.||.|||||.||.||.|||||.||.||.||.
BPUM_1579___a 350 ACTTGCATGACCATAAAGGAATCATTGCAAACCCTAACTGTTCAACGATT 399
BSNT_02718___ 400 CAAATGGTTGCGGCACTTGAACCGATCCGCAAAGCATATGGCTTAAACAA 449
||||||||.||||||.|.||||||.|.||..|.||.||||||.|.||.||
BPUM_1579___a 400 CAAATGGTAGCGGCATTAGAACCGCTTCGTCAGGCGTATGGCATGAAAAA 449
BSNT_02718___ 450 GGTCATCGTATCAACTTACCAGGCAGTATCAGGAGCGGGTAATGAAGCTG 499
.||||||||.||.||||||||.||.||||||||.||.||..|||||||..
BPUM_1579___a 450 AGTCATCGTGTCCACTTACCAAGCCGTATCAGGTGCAGGACATGAAGCCA 499
BSNT_02718___ 500 TAAAAGAGCTTTACAGCCAAACACAGGCGATTTTAAATAAAGAAGAAATA 549
|..|.|||||.||.||||||.||||.||.|||||||||||||||||..|.
BPUM_1579___a 500 TTGACGAGCTATATAGCCAATCACAAGCCATTTTAAATAAAGAAGATGTG 549
BSNT_02718___ 550 GAGCCTGAGATCATGCCTGTAAAAGGTGACAAAAAACACTATCAAATCGC 599
.||||.||..|||||||| ||||||||.||
BPUM_1579___a 550 AAGCCGGAAGTCATGCCT---------------------TATCAAATTGC 578
BSNT_02718___ 600 CTTCAACGCGATTCCGCAAATCGATAAATTCCAAGATAACGGCTATACGT 649
.||.||.||||||||||||||.||||||||||||||.||.||||||||.|
BPUM_1579___a 579 ATTTAATGCGATTCCGCAAATTGATAAATTCCAAGACAATGGCTATACAT 628
BSNT_02718___ 650 TTGAGGAAATGAAAATGATAAATGAAACGAAAAAAATCATGCACATGCCT 699
||||.||||||||||||||.|||||||||||||||||||||||.|||||.
BPUM_1579___a 629 TTGAAGAAATGAAAATGATCAATGAAACGAAAAAAATCATGCATATGCCA 678
BSNT_02718___ 700 GACCTTCAAGTTGCGGCTACATGTGTGAGACTGCCAATCCAAACTGGGCA 749
||.||..||||.|||||.||||||||||||||.|||||..|.||.||.||
BPUM_1579___a 679 GAGCTGGAAGTAGCGGCAACATGTGTGAGACTTCCAATTGAGACAGGACA 728
BSNT_02718___ 750 CTCAGAGTCCGTCTACATTGAGGTAGACCGTGA--TGACGCTACAGTTGA 797
.|||||.||.||.|||.|.||..|||| .|.| ||||||.||||||||
BPUM_1579___a 729 TTCAGAATCTGTTTACGTCGAACTAGA--ATCAACTGACGCAACAGTTGA 776
BSNT_02718___ 798 AGATATTAA---AAATCTATTGAAAGAAGCTCCGGGCGTGACACTTCAGG 844
|||..|.|| .|.|||| |||||.|||||.|||.|.|||||.||.|
BPUM_1579___a 777 AGACGTCAAGTCCATTCTA---AAAGATGCTCCTGGCATTACACTGCAAG 823
BSNT_02718___ 845 ATGATCCAAGCCAGCAGCTTTATCCGATGCCTGCTGATGCTGTCGGCAAA 894
|||||||....|||||..|||||||.||||||||.|||||||||||.|||
BPUM_1579___a 824 ATGATCCGTCTCAGCAAATTTATCCAATGCCTGCAGATGCTGTCGGGAAA 873
BSNT_02718___ 895 AACGATGTGTTTGTGGGCCGCATCCGCAAAGACTTGGACAGAGCAAACGG 944
||.||.||.|||||.||||||||.||.|||||.||||||.|..|||||||
BPUM_1579___a 874 AATGACGTATTTGTCGGCCGCATTCGGAAAGATTTGGACCGTCCAAACGG 923
BSNT_02718___ 945 TTTTCATTTATGGGTTGTTTCTGATAACCTATTAAAAGGCGCGGCATGGA 994
.||.|||.|.|||.||||.|||||||||||..||||||||||.|||||||
BPUM_1579___a 924 GTTCCATATGTGGATTGTATCTGATAACCTGCTAAAAGGCGCTGCATGGA 973
BSNT_02718___ 995 ACTCTGTTCAAATTGCAGAAAGCCTGAAAAAACTAAACCTCGTATAA 1041
|.||.||||||||||||||||||.|.|||..|.||||..|.||.|||
BPUM_1579___a 974 ATTCCGTTCAAATTGCAGAAAGCTTAAAAGCATTAAAATTAGTTTAA 1020
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