Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02712 and BPUM_1576

See DNA alignment / Visit BSNT_02712 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence pep-align/BSNT_02712___ymxH.1.24716.seq
#    -bsequence pep-align/BPUM_1576___ymxH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02712___ymxH-BPUM_1576___ymxH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02712___ymxH-BPUM_1576___ymxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02712___ymxH
# 2: BPUM_1576___ymxH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 90
# Identity:      75/90 (83.3%)
# Similarity:    80/90 (88.9%)
# Gaps:           5/90 ( 5.6%)
# Score: 387.0
# 
#
#=======================================

BSNT_02712___      1 MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALLIPTVKWFGL     50
                     ||||||||||||||||||||||||||||||||||||||||:||:|||||.
BPUM_1576___y      1 MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALIIPSVKWFGF     50

BSNT_02712___     51 RKQGHDIRVPWHHIQKIGSDMIILDVPEEMPPRQE-----     85
                     ||||:||||||:||||||||||||||||.:.|..|     
BPUM_1576___y     51 RKQGNDIRVPWNHIQKIGSDMIILDVPEALQPPGEKEHPS     90


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