Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02710 and BPUM_1573

See DNA alignment / Visit BSNT_02710 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence pep-align/BSNT_02710___ylxY.1.24716.seq
#    -bsequence pep-align/BPUM_1573___ylxY.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02710___ylxY-BPUM_1573___ylxY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02710___ylxY-BPUM_1573___ylxY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02710___ylxY
# 2: BPUM_1573___ylxY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     202/319 (63.3%)
# Similarity:   250/319 (78.4%)
# Gaps:           2/319 ( 0.6%)
# Score: 1090.0
# 
#
#=======================================

BSNT_02710___      1 MYKKFVPFAVFLFLFFVSFEMMENPHALDYIGAMKKDTVTVTASKDQLYE     50
                      .||.:||.||:||..||::.|:.|.|:.||.:||:.....:.|||.||:
BPUM_1573___y      1 -MKKTLPFIVFVFLLLVSYQTMKQPAAVTYIESMKEHAEVASVSKDILYQ     49

BSNT_02710___     51 ELLQKAPEYEVKPQNARIDKVWKSIPGYNGLKVNIEQSYKKMKKHGEFRE    100
                     |:..|:.:||||.|||:||||||.:||.||..|||:.||:||||||.|.|
BPUM_1573___y     50 EIESKSSDYEVKAQNAKIDKVWKKMPGLNGQTVNIDASYEKMKKHGSFDE     99

BSNT_02710___    101 KDLVYSQVKPSVHLESLQPEPIYKGNPDKPMVAFLINVAWGNEYLEKMLP    150
                     |.||:::.|||:||..|..||||||:|||.|.|||||||||:|:|.|||.
BPUM_1573___y    100 KLLVFNETKPSIHLHELGAEPIYKGHPDKKMNAFLINVAWGDEHLIKMLK    149

BSNT_02710___    151 ILQKHQVKATFFLEGNWVRNNEKLAKKIAKDGHEIGNHSYNHPDMSKLTT    200
                     .|:||||||||||||.||:.:..|||||..|||||||||||||||..||.
BPUM_1573___y    150 TLEKHQVKATFFLEGKWVKKSTDLAKKIVADGHEIGNHSYNHPDMRTLTR    199

BSNT_02710___    201 GRISEQLDKTNEQIEQTIGVKPKWFAPPSGSFRKAVIDIAAEKQMGTVMW    250
                     .|..||:.|||.|||:::|.||||||||||||::..:.:||::.|.|:||
BPUM_1573___y    200 ERALEQITKTNRQIEESLGKKPKWFAPPSGSFKEETVKLAAKEGMETIMW    249

BSNT_02710___    251 TVDTIDWQKPAPSVLQTRVLSKIHNGAMILMHPTDPTAESLEALITQIKD    300
                     ||||||||||:|::||.|||.||||||||||||||.||:||:|||||||:
BPUM_1573___y    250 TVDTIDWQKPSPNILQKRVLGKIHNGAMILMHPTDSTAKSLDALITQIKE    299

BSNT_02710___    301 KGYALGTVTELMDETRLLK    319
                     :||.||||::|:.|.|.. 
BPUM_1573___y    300 RGYELGTVSDLLSEKRHP-    317


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