Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02709 and BPUM_1572
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:20
# Commandline: needle
# -asequence pep-align/BSNT_02709___pnpA.1.24716.seq
# -bsequence pep-align/BPUM_1572___pnpA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02709___pnpA-BPUM_1572___pnpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02709___pnpA-BPUM_1572___pnpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02709___pnpA
# 2: BPUM_1572___pnpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 705
# Identity: 642/705 (91.1%)
# Similarity: 678/705 (96.2%)
# Gaps: 0/705 ( 0.0%)
# Score: 3239.0
#
#
#=======================================
BSNT_02709___ 1 MGQEKHVFTIDWAGRTLTVETGQLAKQANGAVMIRYGDTAVLSTATASKE 50
|||||||||||||||.||||||||||||||||::|||||||||:||||||
BPUM_1572___p 1 MGQEKHVFTIDWAGRQLTVETGQLAKQANGAVLVRYGDTAVLSSATASKE 50
BSNT_02709___ 51 PKPLDFFPLTVNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIR 100
||||||||||||||||||||||||||||||||||||||:|||||||||||
BPUM_1572___p 51 PKPLDFFPLTVNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIR 100
BSNT_02709___ 101 PLFADGFRNEVQVISIVMSVDQNCSSEMAAMFGSSLALSVSDIPFEGPIA 150
||||||||||||||||||||||:|||||||||||||||.|||||||||||
BPUM_1572___p 101 PLFADGFRNEVQVISIVMSVDQDCSSEMAAMFGSSLALCVSDIPFEGPIA 150
BSNT_02709___ 151 GVTVGRIDDQFIINPTVDQLEKSDINLVVAGTKDAINMVEAGADEVPEEI 200
||||||:|.:|||||.|:|||:|||||||||||||||||||||||||||.
BPUM_1572___p 151 GVTVGRVDGKFIINPNVEQLEQSDINLVVAGTKDAINMVEAGADEVPEET 200
BSNT_02709___ 201 MLEAIMFGHEEIKRLIAFQEEIVAAVGKEKSEIKLFEIDEELNEKVKALA 250
||||||:||:||||||.||||||.||||.|.:|.|:|:|:.|.::|||||
BPUM_1572___p 201 MLEAIMYGHQEIKRLIEFQEEIVKAVGKAKIDIPLYEVDQTLADEVKALA 250
BSNT_02709___ 251 EEDLLKAIQVHEKHAREDAINEVKNAVVAKFEDEEHDEDTIKQVKQILSK 300
|.||||||||||||||||||:.||.|||.|||:|:.||.||||.|.:|:|
BPUM_1572___p 251 ETDLLKAIQVHEKHAREDAISAVKKAVVEKFEEEDRDEATIKQAKDVLNK 300
BSNT_02709___ 301 LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQ 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1572___p 301 LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQ 350
BSNT_02709___ 351 ALSVCTLGALGDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRR 400
|||:||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1572___p 351 ALSICTLGALGDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRR 400
BSNT_02709___ 401 EIGHGALGERALEPVIPSEKDFPYTVRLVSEVLESNGSTSQASICASTLA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1572___p 401 EIGHGALGERALEPVIPSEKDFPYTVRLVSEVLESNGSTSQASICASTLA 450
BSNT_02709___ 451 MMDAGVPIKAPVAGIAMGLVKSGEHYTVLTDIQGMEDALGDMDFKVAGTE 500
||||||||||||||||||||||||:||||||||||||||||||||||||.
BPUM_1572___p 451 MMDAGVPIKAPVAGIAMGLVKSGEYYTVLTDIQGMEDALGDMDFKVAGTS 500
BSNT_02709___ 501 KGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLATLSESRKELS 550
||||||||||||:|||::|||||||||||||||||:|||:|:..||.|||
BPUM_1572___p 501 KGVTALQMDIKIDGLSKDILEEALQQAKKGRMEILDSMLSTIPTSRGELS 550
BSNT_02709___ 551 RYAPKILTMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIFISS 600
|||||||||.||||||||||||||||||||||:|||||||||||||||||
BPUM_1572___p 551 RYAPKILTMKINPDKIRDVIGPSGKQINKIIEDTGVKIDIEQDGTIFISS 600
BSNT_02709___ 601 TDESGNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLV 650
|:|..||||||||||||||||||||||||||||||||||:||||||||||
BPUM_1572___p 601 TEEDMNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFLEIFSGKDGLV 650
BSNT_02709___ 651 HISELALERVGKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEK 700
|||||||:||||||||||||||:|||||||||||||||||||||||||||
BPUM_1572___p 651 HISELALDRVGKVEDVVKIGDELLVKVTEIDKQGRVNLSRKAVLREEKEK 700
BSNT_02709___ 701 EEQQS 705
||:||
BPUM_1572___p 701 EEKQS 705
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