Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02709 and BPUM_1572
See
Amino acid alignment /
Visit
BSNT_02709 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_02709___pnpA.1.24716.seq
# -bsequence dna-align/BPUM_1572___pnpA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02709___pnpA-BPUM_1572___pnpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02709___pnpA-BPUM_1572___pnpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02709___pnpA
# 2: BPUM_1572___pnpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2136
# Identity: 1701/2136 (79.6%)
# Similarity: 1701/2136 (79.6%)
# Gaps: 36/2136 ( 1.7%)
# Score: 6720.0
#
#
#=======================================
BSNT_02709___ 1 ATGGGACAAGAAAAACATGTCTTTACCATAGATTGGGCCGGAAG--AACG 48
|||||||||||.|||||||||||.||||||||.|||||.|||.| ||
BPUM_1572___p 1 ATGGGACAAGAGAAACATGTCTTCACCATAGACTGGGCTGGACGTCAA-- 48
BSNT_02709___ 49 CTTACTGTTGAAACCGGCCAGCTTGCCAAACAGGCAAATGGTGCTGTGAT 98
||.||.||||||||.|||||||||||.||.||.|||||.||.||.||..|
BPUM_1572___p 49 CTGACAGTTGAAACTGGCCAGCTTGCAAAGCAAGCAAACGGAGCGGTCCT 98
BSNT_02709___ 99 GATCCGCTACGGTGATACAGCAGTACTTAGTACAGCAACCGCTTCAAAAG 148
..|.||||||||.||||||||.||||||||..|||||||.|||||.||||
BPUM_1572___p 99 CGTACGCTACGGAGATACAGCTGTACTTAGCTCAGCAACAGCTTCTAAAG 148
BSNT_02709___ 149 AACCTAAACCGCTTGATTTCTTCCCTCTTACTGTAAACTATGAAGAAAGA 198
||||.|||||.||||||||||||||.||.|||||.|||||.|||||||||
BPUM_1572___p 149 AACCAAAACCACTTGATTTCTTCCCGCTCACTGTGAACTACGAAGAAAGA 198
BSNT_02709___ 199 TTATATGCGGTAGGGAAAATTCCGGGCGGATTTATTAAAAGAGAAGGACG 248
|||||.||.|||||.||||||||.||.||.||.||||||||||||||.||
BPUM_1572___p 199 TTATACGCAGTAGGTAAAATTCCTGGTGGCTTCATTAAAAGAGAAGGCCG 248
BSNT_02709___ 249 TCCAAGTGAAAAAGCGGTTCTTGCCAGCCGTTTAATTGACCGTCCGATCC 298
||||||||||||||||.|.|||||.|||||.||||||||..|.||.||||
BPUM_1572___p 249 TCCAAGTGAAAAAGCGATCCTTGCGAGCCGCTTAATTGATAGACCAATCC 298
BSNT_02709___ 299 GTCCTTTGTTTGCCGATGGATTCCGTAATGAAGTTCAAGTCATCAGCATT 348
||||.||.|||||.||||||||..|.||.|||||.|||||.||.||.||.
BPUM_1572___p 299 GTCCATTATTTGCAGATGGATTTAGAAACGAAGTACAAGTGATTAGTATC 348
BSNT_02709___ 349 GTCATGAGTGTTGACCAAAACTGCTCTTCAGAAATGGCTGCCATGTTCGG 398
||.||||||||.||.|||.|.||.||.||.|||||||||||.|||||.||
BPUM_1572___p 349 GTTATGAGTGTGGATCAAGATTGTTCATCTGAAATGGCTGCAATGTTTGG 398
BSNT_02709___ 399 TTCATCTCTTGCACTTTCTGTATCGGATATTCCGTTTGAAGGACCGATTG 448
.|||||..|.|||.|.|.|||.||.||.|||||.|||||.|||||.||.|
BPUM_1572___p 399 CTCATCATTAGCATTATGTGTGTCTGACATTCCATTTGAGGGACCAATCG 448
BSNT_02709___ 449 CAGGGGTTACTGTCGGACGCATTGATGATCAATTTATCATTAACCCGACA 498
|.||.|||||.||.|||||..||||||...|.||||||||.||.||.|..
BPUM_1572___p 449 CCGGCGTTACAGTAGGACGAGTTGATGGAAAGTTTATCATCAATCCAAAT 498
BSNT_02709___ 499 GTCGATCAGCTTGAAAAAAGCGACATCAATCTTGTCGTTGCCGGCACGAA 548
||.||.|||||||||.||||.||||||||.|||||.||.||.||.||.||
BPUM_1572___p 499 GTAGAACAGCTTGAACAAAGTGACATCAACCTTGTAGTCGCTGGAACAAA 548
BSNT_02709___ 549 AGATGCGATTAACATGGTAGAAGCGGGAGCGGACGAAGTTCCTGAGGAAA 598
|||||||||.||||||||.|||||.||.||.||.|||||.||.||.||||
BPUM_1572___p 549 AGATGCGATCAACATGGTCGAAGCTGGTGCTGATGAAGTACCAGAAGAAA 598
BSNT_02709___ 599 TCATGCTTGAGGCCATTATGTTCGGCCATGAAGAGATTAAACGCCTGATT 648
..||||||||.||.||.||||..||.||..|||||||.|||||..|.||.
BPUM_1572___p 599 CAATGCTTGAAGCGATCATGTATGGTCACCAAGAGATCAAACGTTTAATC 648
BSNT_02709___ 649 GCATTCCAAGAAGAAATTGTTGCAGCAGTCGGCAAAG-AGAAATCTGAAA 697
|.|||||||||.||||||||...|||||||||.|||| |.|.||| ||.|
BPUM_1572___p 649 GAATTCCAAGAGGAAATTGTCAAAGCAGTCGGTAAAGCAAAGATC-GATA 697
BSNT_02709___ 698 TTAAGCTCTT----TGAAATTGATGAAGAGCTTA----ATGAAAAAGTAA 739
|| .||| ||||.|.|||.|| |..||| ||| ||||.|
BPUM_1572___p 698 TT----CCTTTATATGAAGTAGATCAA-ACGTTAGCAGATG---AAGTCA 739
BSNT_02709___ 740 AAGCTTTGGCAGAAGAGGATCTGCTGAAAGCCATCCAAGTTCATGAAAAG 789
|.||..|.||.|||...||.|||||||||||.||.|||||.|||||.|||
BPUM_1572___p 740 AGGCACTTGCTGAAACAGACCTGCTGAAAGCGATTCAAGTACATGAGAAG 789
BSNT_02709___ 790 CATGCCCGTGAAGATGCCATTAACGAAGTGAAGAACGCAGTTGTGGCAAA 839
|||||.|||||||||||.||.|..|..|||||.||.||.||.||.|..||
BPUM_1572___p 790 CATGCACGTGAAGATGCAATCAGTGCTGTGAAAAAAGCTGTGGTTGAGAA 839
BSNT_02709___ 840 ATTCGAGGATGAAGAACATGATGAAGACACAATCAAGCAAGTGAAGCAGA 889
|||.||.||.|||||.|..||.||||..||.||.||.||||.||| |||
BPUM_1572___p 840 ATTTGAAGAAGAAGATCGCGACGAAGCGACGATTAAACAAGCGAA--AGA 887
BSNT_02709___ 890 --TTTTATCCAAGCTGGTGAAAAATGAAGTTCGCCGCCTGATTACTGAAG 937
|.|||..||||||.||.||||||||||||||.||.|||||.|||||||
BPUM_1572___p 888 TGTATTAAACAAGCTTGTCAAAAATGAAGTTCGTCGTCTGATCACTGAAG 937
BSNT_02709___ 938 AGAAAGTAAGACCGGATGGCCGCGGTGTCGATCAAATCCGCCCGCTCTCT 987
||||||||.|.||.|||||.||||||||.|||||||||||.||.||.|||
BPUM_1572___p 938 AGAAAGTACGTCCAGATGGACGCGGTGTAGATCAAATCCGGCCACTTTCT 987
BSNT_02709___ 988 TCAGAGGTTGGCCTCTTGCCAAGAACGCACGGTTCAGGTCTATTTACAAG 1037
|||||.||.||.||..||||||||||||||||||||||||||||||||||
BPUM_1572___p 988 TCAGAAGTAGGACTTCTGCCAAGAACGCACGGTTCAGGTCTATTTACAAG 1037
BSNT_02709___ 1038 GGGACAAACTCAGGCCCTCAGCGTATGTACGCTAGGTGCTCTGGGAGATG 1087
.||||||||.|||||.||.||..|.|||||..|||||||.||.||.||||
BPUM_1572___p 1038 AGGACAAACACAGGCGCTTAGTATTTGTACATTAGGTGCACTTGGCGATG 1087
BSNT_02709___ 1088 TGCAGATCCTTGACGGCTTAGGTGTCGAAGAGTCGAAACGGTTTATGCAT 1137
||||.||.||||||||.|||||.||.|||||.||.|||||.||.|||||.
BPUM_1572___p 1088 TGCAAATTCTTGACGGTTTAGGCGTTGAAGAATCAAAACGCTTCATGCAC 1137
BSNT_02709___ 1138 CATTACAACTTCCCGCAATTCAGCGTTGGGGAAACAGGACCGATGCGCGG 1187
|||||||||||||||||||||||.|||||.||.|||||.||.|||||.||
BPUM_1572___p 1138 CATTACAACTTCCCGCAATTCAGTGTTGGTGAGACAGGTCCAATGCGTGG 1187
BSNT_02709___ 1188 ACCGGGACGTCGTGAAATCGGACACGGAGCACTGGGTGAGCGTGCGCTTG 1237
.||.||.||.||||||||.|||||.|||||.||.|||||.||.||..|.|
BPUM_1572___p 1188 CCCAGGCCGACGTGAAATTGGACATGGAGCGCTAGGTGAACGAGCATTAG 1237
BSNT_02709___ 1238 AGCCAGTTATTCCGTCTGAAAAAGACTTCCCTTATACTGTCCGTCTTGTT 1287
|.|||||.|||||.|||||||||||.|||||||||||.||.||.|||||.
BPUM_1572___p 1238 AACCAGTGATTCCATCTGAAAAAGATTTCCCTTATACGGTTCGCCTTGTG 1287
BSNT_02709___ 1288 TCAGAAGTGCTTGAATCAAACGGTTCTACATCTCAAGCAAGCATTTGCGC 1337
||.||.||.||.|||||||||||.|||||.||.||||||||.||||||||
BPUM_1572___p 1288 TCTGAGGTACTAGAATCAAACGGATCTACTTCACAAGCAAGTATTTGCGC 1337
BSNT_02709___ 1338 AAGCACACTTGCAATGATGGATGCTGGTGTACCGATTAAAGCGCCAGTTG 1387
||||||||||||.|||||||||||.|||||.||.||||||||.|||||||
BPUM_1572___p 1338 AAGCACACTTGCGATGATGGATGCGGGTGTTCCAATTAAAGCACCAGTTG 1387
BSNT_02709___ 1388 CTGGTATTGCGATGGGTCTTGTCAAATCAGGCGAACATTACACTGTCTTG 1437
|.||.|||||.|||||.|||||.|||||.||.|||.|.|||||.||..||
BPUM_1572___p 1388 CAGGGATTGCAATGGGACTTGTGAAATCTGGTGAATACTACACAGTGCTG 1437
BSNT_02709___ 1438 ACTGACATCCAAGGCATGGAAGATGCGCTCGGAGATATGGACTTTAAAGT 1487
||.|||||.|||||.|||||||||||.||.||.|||||||||||||||||
BPUM_1572___p 1438 ACAGACATTCAAGGAATGGAAGATGCACTTGGCGATATGGACTTTAAAGT 1487
BSNT_02709___ 1488 AGCGGGAACTGAAAAAGGCGTAACGGCCCTGCAAATGGACATTAAAATTG 1537
.||.||.||...||||||.|||||.||.||.||||||||.||.|||||||
BPUM_1572___p 1488 GGCAGGTACATCAAAAGGTGTAACTGCACTTCAAATGGATATCAAAATTG 1537
BSNT_02709___ 1538 AAGGCCTTTCCAGAGAGATTCTT-GAAGAAGCGCTTCAGCAGGCGAAAAA 1586
|.||.||.||.|.|||.| |||| ||||||||.||.||.||.||||||||
BPUM_1572___p 1538 ATGGTCTATCAAAAGACA-TCTTGGAAGAAGCTCTCCAACAAGCGAAAAA 1586
BSNT_02709___ 1587 GGGCAGAATGGAAATCCTCAACAGCATGCTTGCAAC-ATTAAGCGAA--T 1633
.||.|||||||||||..|..|.||||||||..|||| ||| |..| |
BPUM_1572___p 1587 AGGAAGAATGGAAATTTTAGATAGCATGCTATCAACGATT---CCTACTT 1633
BSNT_02709___ 1634 CAAGAAAAGAGCTTTCTCGATATGCGCCTAAGATCTTAACAATGACCATT 1683
|.|||..|||..|.|||||.|||||.||.||.||||||||.||||..||.
BPUM_1572___p 1634 CTAGAGGAGAATTGTCTCGTTATGCACCAAAAATCTTAACGATGAAAATC 1683
BSNT_02709___ 1684 AATCCTGATAAAATCCGCGATGTCATCGGACCAAGCGGAAAACAAATCAA 1733
||||||||||||||.|||||||||||||||||||||||.|||||||||||
BPUM_1572___p 1684 AATCCTGATAAAATTCGCGATGTCATCGGACCAAGCGGTAAACAAATCAA 1733
BSNT_02709___ 1734 TAAGATCATCGAAGAAACCGGTGTTAAAATTGATATTGAGCAGGACGGCA 1783
|||.|||||||||||.||||||||.||||||||||||||.||.||.||.|
BPUM_1572___p 1734 TAAAATCATCGAAGATACCGGTGTGAAAATTGATATTGAACAAGATGGTA 1783
BSNT_02709___ 1784 CAATCTTTATTTCCTCTACAGATGAAAGCGGCAACCAAAAAGCGAAAAAA 1833
||||||||||.||.||||||||.|||..|...||.|||||||||||.|||
BPUM_1572___p 1784 CAATCTTTATCTCTTCTACAGAAGAAGACATGAATCAAAAAGCGAAGAAA 1833
BSNT_02709___ 1834 ATCATCGAAGACCTTGTTAGAGAGGTTGAAGTCGGCCAACTTTACCTAGG 1883
|||||.|||||.|||||.|||||.||||||||.||.|||||||||.||||
BPUM_1572___p 1834 ATCATTGAAGATCTTGTGAGAGAAGTTGAAGTAGGACAACTTTACTTAGG 1883
BSNT_02709___ 1884 TAAAGTGAAACGGATTGAAAAATTCGGGGCTTTCGTTGAAATTTTCAGCG 1933
||||||.|||||.||||||||||||||.||||||.|||||||.|||||||
BPUM_1572___p 1884 TAAAGTAAAACGCATTGAAAAATTCGGTGCTTTCCTTGAAATCTTCAGCG 1933
BSNT_02709___ 1934 GAAAAGACGGTTTGGTGCACATTTCAGAGCTTGCGCTTGAACGCGTAGGG 1983
|.|||||.||..|.||.||.|||||.||.|||||||||||.||.|||||.
BPUM_1572___p 1934 GCAAAGATGGACTTGTTCATATTTCTGAACTTGCGCTTGATCGTGTAGGC 1983
BSNT_02709___ 1984 AAAGTTGAAGATGTTGTAAAAATCGGAGACGAGATT-CTTGTCAAAGTCA 2032
|||||.|||||||||||.|||||.||.||.|| ||| |||||||||||||
BPUM_1572___p 1984 AAAGTAGAAGATGTTGTGAAAATTGGCGATGA-ATTACTTGTCAAAGTCA 2032
BSNT_02709___ 2033 CTGAAATTGATAAACAAGGACGAGTGAATTTATCCCGCAAAGCGGTGCTC 2082
|||||||.|||||||||||.||.|||||..|.||.||||||||.||..|.
BPUM_1572___p 2033 CTGAAATCGATAAACAAGGCCGTGTGAACCTTTCTCGCAAAGCTGTTTTA 2082
BSNT_02709___ 2083 CGTGAAGAGAAAGAAAAAGAAGAACAACAATCTTAA 2118
||||||||.||.||||||||||||.||||.||||||
BPUM_1572___p 2083 CGTGAAGAAAAGGAAAAAGAAGAAAAACAGTCTTAA 2118
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.