Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02708 and BPUM_1570

See DNA alignment / Visit BSNT_02708 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence pep-align/BSNT_02708___ribC.1.24716.seq
#    -bsequence pep-align/BPUM_1570___ribC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02708___ribC-BPUM_1570___ribC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02708___ribC-BPUM_1570___ribC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02708___ribC
# 2: BPUM_1570___ribC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     214/321 (66.7%)
# Similarity:   272/321 (84.7%)
# Gaps:           5/321 ( 1.6%)
# Score: 1175.0
# 
#
#=======================================

BSNT_02708___      1 MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVICTAKQIAEEKGL     50
                     ||||||:|||.|.:::|..|||||||||||||||||||..||.||.::||
BPUM_1570___r      1 MKTIHISHPHTLNQKDQDPSVMALGYFDGVHLGHQKVIDAAKSIARKEGL     50

BSNT_02708___     51 TLAVMTFHPHPSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNE    100
                     .||||||||||||||.:.:|||||||||||||:.|||||.:.:|:|:|:|
BPUM_1570___r     51 ALAVMTFHPHPSHVLQKAREPKDLITPLEDKIDFIEQLGADYVYIVQFSE    100

BSNT_02708___    101 VFASLSPKQFIDQYIIGLNVQHAVAGFDFTYGKYGKGTMKTMPDDLDGKA    150
                     .||:|||::|:|||:..|||:|||||||||:|::|.|||:|..:...|:.
BPUM_1570___r    101 SFAALSPQEFVDQYLDELNVKHAVAGFDFTFGRFGAGTMETFDEYGKGRM    150

BSNT_02708___    151 GCTMVEKLTEQDKKISSSYIRTALQNGDVELANVLLGQPYFIKGIVIHGD    200
                     ..|:|.||:.||:|:||:.||:||:|||||..:.|||:||.::|||||||
BPUM_1570___r    151 TATIVPKLSNQDRKVSSTLIRSALKNGDVEYVSELLGKPYQLRGIVIHGD    200

BSNT_02708___    201 KRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEVYNGVCNIGYKPTF    250
                     |||||||||||||||:..||:||||||||:|||.|::|:||||:||||||
BPUM_1570___r    201 KRGRTIGFPTANVGLSAEYIIPPTGVYAVRAEVKGKMYDGVCNVGYKPTF    250

BSNT_02708___    251 YEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKELTEQI    300
                     |||||:||:||||||.|::|:||..||::|:||||||:|||||:|||.||
BPUM_1570___r    251 YEKRPDQPAIEVNLFGFNEEIYGEPIKLQWFKRIRSEQKFNGIQELTAQI    300

BSNT_02708___    301 EKDKQEAIRYFSNLRK-----    316
                     ..||:|||::|.:.||     
BPUM_1570___r    301 SLDKEEAIQFFQHQRKQTKNS    321


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