Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02707 and BPUM_1569

See DNA alignment / Visit BSNT_02707 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence pep-align/BSNT_02707___truB.1.24716.seq
#    -bsequence pep-align/BPUM_1569___truB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02707___truB-BPUM_1569___truB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02707___truB-BPUM_1569___truB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02707___truB
# 2: BPUM_1569___truB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     213/309 (68.9%)
# Similarity:   246/309 (79.6%)
# Gaps:           0/309 ( 0.0%)
# Score: 1126.0
# 
#
#=======================================

BSNT_02707___      1 MVNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICV     50
                     |:||||||||..||||||||.|:||:|.|||||||||||||||||||||:
BPUM_1569___t      1 MINGVLLLHKERGMTSHDCVFKVRKILHTKKVGHTGTLDPEVSGVLPICI     50

BSNT_02707___     51 GRATKIVEYLTEKSKTYDAEITLGFSTTTEDQTGETVEIKPVNHDIDKAD    100
                     |||||||||||:||||||||||:||||||||||||.||.|.|.:.|.:.:
BPUM_1569___t     51 GRATKIVEYLTDKSKTYDAEITIGFSTTTEDQTGEIVEEKKVQNPISEEE    100

BSNT_02707___    101 VEKVLNSLKGKQEQIPPMYSAVKVNGKKLYEYARAGIEVERPKRMITIED    150
                     ::..|...:|..||||||:||||:.|||||||||.|||:|||.|.|:|..
BPUM_1569___t    101 IDAALKQFQGTIEQIPPMFSAVKIGGKKLYEYAREGIEIERPSREISIHR    150

BSNT_02707___    151 IALTTEIKHHGETASFRFTVTCSKGTYVRTLAVMIGEKLGYPAHMSHLIR    200
                     |..||.......|.||||||.||||||||||||.||:|||:|||||||||
BPUM_1569___t    151 IERTTPALFENGTVSFRFTVLCSKGTYVRTLAVDIGKKLGFPAHMSHLIR    200

BSNT_02707___    201 TASGDFSLDECFTFDELEAQAQSGTVEEHTVPIERALNHLPKWIISDTLA    250
                     |.||||:||||.|.|||...::.|||:||.|||||||||||||.|:||||
BPUM_1569___t    201 TGSGDFTLDECITLDELRDISEEGTVDEHLVPIERALNHLPKWEINDTLA    250

BSNT_02707___    251 KKVENGALLETPEQFSEMTSEDRIAVFTESGTCLAIYFPHPAKKGLLKPA    300
                     .||||||:|..|::|:....|||:|||..||.|:|||..||.|:.|:|||
BPUM_1569___t    251 SKVENGAVLPMPDEFAHFAEEDRVAVFAPSGRCMAIYMKHPTKQNLMKPA    300

BSNT_02707___    301 KVLMQKSEQ    309
                     |:|.|..:.
BPUM_1569___t    301 KILSQDKQS    309


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