Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02701 and BPUM_1564

See DNA alignment / Visit BSNT_02701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_02701___ylxR.1.24716.seq
#    -bsequence pep-align/BPUM_1564___ylxR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02701___ylxR-BPUM_1564___ylxR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02701___ylxR-BPUM_1564___ylxR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02701___ylxR
# 2: BPUM_1564___ylxR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 99
# Identity:      76/99 (76.8%)
# Similarity:    83/99 (83.8%)
# Gaps:           8/99 ( 8.1%)
# Score: 385.0
# 
#
#=======================================

BSNT_02701___      1 ---MNKHKKIPLRKCVVTGEMKPKKELIRVVRSKEGEISVDPTGKKNGRG     47
                        :|..||||||||||||||||||||||||||||||:|||.||||||||
BPUM_1564___y      1 MYKVNSRKKIPLRKCVVTGEMKPKKELIRVVRSKEGEVSVDATGKKNGRG     50

BSNT_02701___     48 AYLTLDKECILAAKKKNTLQNQFQSQIDDQIFDELLELAEKVKK-----     91
                     |||:||||.|||||.|.:||.|||:|||:.||:|||||||||||     
BPUM_1564___y     51 AYLSLDKETILAAKNKRSLQQQFQTQIDEHIFEELLELAEKVKKPNESI     99


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