Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02698 and BPUM_1562

See DNA alignment / Visit BSNT_02698 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_02698___ylxS.1.24716.seq
#    -bsequence pep-align/BPUM_1562___ylxS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02698___ylxS-BPUM_1562___ylxS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02698___ylxS-BPUM_1562___ylxS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02698___ylxS
# 2: BPUM_1562___ylxS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     132/157 (84.1%)
# Similarity:   141/157 (89.8%)
# Gaps:           1/157 ( 0.6%)
# Score: 682.0
# 
#
#=======================================

BSNT_02698___      1 MSKKVTDTVQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDDGVDI     50
                     |||||.|.|.||.|||:|.|||||||:|||||||:||||||||||.||||
BPUM_1562___y      1 MSKKVVDVVSEMVQPILDGLQLELVDVEFVKEGQNWFLRVFIDSDKGVDI     50

BSNT_02698___     51 EECAKVSEALSEKLDEADPISQNYFLEVSSPGAERPLKKKADFEKSLGKN    100
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
BPUM_1562___y     51 EECAKVSEALSEKLDEADPISQNYFLEVSSPGAERPLKKKADFEKALGKN    100

BSNT_02698___    101 VYIKTYEPIDGVKVFEGELAEFDGQTVTVEITIKTRKKRINIPYEKIANA    150
                     |::||||||||.|.|||||..|||:..||.:.||||||.|||||||||||
BPUM_1562___y    101 VFMKTYEPIDGEKAFEGELTSFDGEIATVTVKIKTRKKEINIPYEKIANA    150

BSNT_02698___    151 RLAVTF-    156
                     ||||:| 
BPUM_1562___y    151 RLAVSFN    157


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