Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02691 and BPUM_1553

See DNA alignment / Visit BSNT_02691 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence pep-align/BSNT_02691___cdsA.1.24716.seq
#    -bsequence pep-align/BPUM_1553___cdsA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02691___cdsA-BPUM_1553___cdsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02691___cdsA-BPUM_1553___cdsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02691___cdsA
# 2: BPUM_1553___cdsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     164/267 (61.4%)
# Similarity:   196/267 (73.4%)
# Gaps:          36/267 (13.5%)
# Score: 850.5
# 
#
#=======================================

BSNT_02691___      1 MKQRILTGVLAAIVFLFLVIVGKLPFTILIYAMGSVALFELLRMKKLKLV     50
                                                     ||||||||||||||:.:.
BPUM_1553___c      1 --------------------------------MGSVALFELLRMKKISIF     18

BSNT_02691___     51 SLPGLIGLLLLWMFLLPSQYSFFEADGISKMEIALFAVLLLLTYTVLVKN    100
                     |:||::.|:|||: |:..:.|||.....|||:|||||||:|||||||.||
BPUM_1553___c     19 SIPGIVSLILLWL-LMGGENSFFPNVDASKMQIALFAVLILLTYTVLSKN     67

BSNT_02691___    101 TFTFDEVGFITLAAIYIGMCFHYFIEIRNLDQYGLTYIFYACVVIWSTDS    150
                     :||||||.|:.||.:|||:.|:|||:||.|  ||::.||:|.|:||||||
BPUM_1553___c     68 SFTFDEVAFVILATLYIGVSFYYFIQIRGL--YGMSAIFFAAVIIWSTDS    115

BSNT_02691___    151 GAYFVGKSLGKRKLWPEISPNKTVEGFAGGIVIALVLATIFQLVAQLPIP    200
                     ||||:|||:||||||||||||||||||.||||.|:||:.:||.|......
BPUM_1553___c    116 GAYFIGKSMGKRKLWPEISPNKTVEGFIGGIVTAVVLSFVFQAVTGFLPS    165

BSNT_02691___    201 YIYLLLITLFLSVFGQLGDLVESALKRHYDVKDSGKILPGHGGILDRFDS    250
                     |:.::.|||.||:||||||||||||||||||||||.||||||||||||||
BPUM_1553___c    166 YLLVMFITLLLSIFGQLGDLVESALKRHYDVKDSGTILPGHGGILDRFDS    215

BSNT_02691___    251 FLFVMPFLYFLLALFS-    266
                     ||||:||||.|||.|: 
BPUM_1553___c    216 FLFVLPFLYLLLATFAS    232


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